Detailed information of amic_s0094.g31.t1 in Acropora microphthalma

Genomic Location: sc0000094_pilon:523030...532330
NR annotation: XP_029196600.1, E3 ubiquitin-protein ligase MARCHF3-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001027 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906
all species →		RINGvRING-variant domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011016
all species →		DomainZinc finger, RING-CH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46065
all species →		E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10657MARCH2_3; E3 ubiquitin-protein ligase MARCH2/3EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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