Detailed information of amic_s0094.g6.t1 in Acropora microphthalma

Genomic Location: sc0000094_pilon:53386...60415
NR annotation: XP_029194847.2, disease resistance protein RPS2-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8W474Probable disease resistance protein At1g58390 OS=Arabidopsis thaliana OX=3702 GN=At1g58390 PE=2 SV=4
P59584Disease resistance protein RPH8A OS=Arabidopsis thaliana OX=3702 GN=RPH8A PE=3 SV=1
Q9FJK8Probable disease resistance RPP8-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RPP8L4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000307 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01335
all species →		DEDDeath effector domainDomainInterproscan
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13401
all species →		AAA_22AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001875
all species →		DomainDeath effector domainInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR049945
all species →		DomainORC1/DEAH AAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47691
all species →		REGULATOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0042981
all species →		Biological Processregulation of apoptotic processInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0094.g6.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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