Detailed information of amic_s0095.g28.t2 in Acropora microphthalma

Genomic Location: sc0000095_pilon:540475...547955
NR annotation: XP_044184597.1, uncharacterized protein SYNPCC7002_A1628-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P28606Uncharacterized protein SYNPCC7002_A1628 OS=Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=SYNPCC7002_A1628 PE=3 SV=2
Q944K3Histone deacetylase 2 OS=Arabidopsis thaliana OX=3702 GN=HDA2 PE=2 SV=2
Q5HF39Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain COL) OX=93062 GN=acuC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008840 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850
all species →		Hist_deacetylHistone deacetylase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050284
all species →		FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR023801
all species →		DomainHistone deacetylase domainInterproscan
IPR037138
all species →		Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR044150
all species →		DomainHistone deacetylase 11Interproscan
IPR000286
all species →		FamilyHistone deacetylase familyInterproscan
IPR023696
all species →		Homologous_superfamilyUreohydrolase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10625
all species →		HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004407
all species →		Molecular Functionhistone deacetylase activityInterproscan
GO:0016575
all species →		Biological Processobsolete histone deacetylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0095.g28.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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