Gene detail

Detailed information of amic_s0095.g3.t1 in Acropora microphthalma

Genomic Location: sc0000095_pilon:55886...58896
NR annotation: XP_015763365.1, PREDICTED: GTPase Era, mitochondrial-like isoform X1 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B0S6U7	GTPase Era, mitochondrial OS=Danio rerio OX=7955 GN=eral1 PE=2 SV=1
B5X2B8	GTPase Era, mitochondrial OS=Salmo salar OX=8030 GN=eral1 PE=2 SV=1
O75616	GTPase Era, mitochondrial OS=Homo sapiens OX=9606 GN=ERAL1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007852 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005662 all species →	Family	GTPase Era	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR009019 all species →	Homologous_superfamily	K homology domain superfamily, prokaryotic type	Interproscan
IPR030388 all species →	Domain	Era-type guanine nucleotide-binding (G) domain	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR015946 all species →	Homologous_superfamily	K homology domain-like, alpha/beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42698 all species →	GTPASE ERA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0043024 all species →	Molecular Function	ribosomal small subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0095.g3.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.