Detailed information of amic_s0095.g35.t1 in Acropora microphthalma

Genomic Location: sc0000095_pilon:631676...638782
NR annotation: XP_029202769.2, uncharacterized protein LOC114966956 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007799 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15702
all species →		HPS6Hermansky-Pudlak syndrome 6 protein N-terminal domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046823
all species →		DomainBLOC-2 complex member HPS6, N-terminal domainInterproscan
IPR017218
all species →		FamilyBLOC-2 complex, Hps6 subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14696
all species →		HERMANSKY-PUDLAK SYNDROME 6 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005765
all species →		Cellular Componentlysosomal membraneInterproscan
GO:0006996
all species →		Biological Processorganelle organizationInterproscan
GO:0031084
all species →		Cellular ComponentBLOC-2 complexInterproscan
GO:0032418
all species →		Biological Processlysosome localizationInterproscan
GO:0072657
all species →		Biological Processprotein localization to membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20192HPS6; Hermansky-Pudlak syndrome 6 protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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