Detailed information of amic_s0096.g47.t1 in Acropora microphthalma

Genomic Location: sc0000096_pilon:705635...712232
NR annotation: XP_029179372.2, vesicle-associated membrane protein 8-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32L97Vesicle-associated membrane protein 4 OS=Bos taurus OX=9913 GN=VAMP4 PE=2 SV=1
O75379Vesicle-associated membrane protein 4 OS=Homo sapiens OX=9606 GN=VAMP4 PE=1 SV=2
O70480Vesicle-associated membrane protein 4 OS=Mus musculus OX=10090 GN=Vamp4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001916 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00957
all species →		SynaptobrevinSynaptobrevinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001388
all species →		FamilySynaptobrevin-likeInterproscan
IPR042855
all species →		Domainv-SNARE, coiled-coil homology domainInterproscan
IPR042887
all species →		FamilyVesicle-associated membrane protein 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46897
all species →		VESICLE-ASSOCIATED MEMBRANE PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0090161
all species →		Biological ProcessGolgi ribbon formationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08513VAMP4; vesicle-associated membrane protein 4-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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