Detailed information of amic_s0096.g58.t2 in Acropora microphthalma

Genomic Location: sc0000096_pilon:894235...909637
NR annotation: XP_015777236.1, PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
A0A1D5NSM8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004370 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF00050
all species →		Kazal_1Kazal-type serine protease inhibitor domainDomainInterproscan
PF00014
all species →		Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002223
all species →		DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR036058
all species →		Homologous_superfamilyKazal domain superfamilyInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR002350
all species →		DomainKazal domainInterproscan
IPR036880
all species →		Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR020901
all species →		Conserved_siteProteinase inhibitor I2, Kunitz, conserved siteInterproscan
IPR050350
all species →		FamilyComplement & Cell Adhesion RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19325
all species →		COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004867
all species →		Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23377THSD4, ADAMTSL6; thrombospondin type-1 domain-containing protein 4-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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