Detailed information of amic_s0097.g51.t1 in Acropora microphthalma

Genomic Location: sc0000097_pilon:862311...883492
NR annotation: XP_015762890.1, PREDICTED: uncharacterized protein LOC107341935 isoform X1 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58EK5Tudor domain-containing protein 1 OS=Danio rerio OX=7955 GN=tdrd1 PE=1 SV=2
Q99MV1Tudor domain-containing protein 1 OS=Mus musculus OX=10090 GN=Tdrd1 PE=1 SV=2
Q9BXT4Tudor domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TDRD1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003584 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567
all species →
TUDORTudor domainDomainInterproscan
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan
PF01753
all species →
zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR002999
all species →
DomainTudor domainInterproscan
IPR035437
all species →
Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR002893
all species →
DomainZinc finger, MYND-typeInterproscan
IPR050621
all species →
FamilyTudor domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22948
all species →
TUDOR DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18405TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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