Gene detail

Detailed information of amic_s0098.g35.t1 in Acropora microphthalma

Genomic Location: sc0000098_pilon:779088...785962
NR annotation: XP_044176880.1, spermatogenesis-associated protein 4-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DMN8	Spermatogenesis-associated protein 4 OS=Pan troglodytes OX=9598 GN=SPATA4 PE=2 SV=1
Q8NEY3	Spermatogenesis-associated protein 4 OS=Homo sapiens OX=9606 GN=SPATA4 PE=1 SV=1
Q8K3V1	Spermatogenesis-associated protein 4 OS=Mus musculus OX=10090 GN=Spata4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006006 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06294 all species →	CH_2	CH-like domain in sperm protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052111 all species →	Family	Spermatogenesis and Ciliary Microtubule-associated Protein	Interproscan
IPR010441 all species →	Domain	CH-like domain in sperm protein	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12509 all species →	SPERMATOGENESIS-ASSOCIATED 4-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0051493 all species →	Biological Process	regulation of cytoskeleton organization	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25616	SPATA4; spermatogenesis-associated protein 4	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.