Gene detail

Detailed information of amic_s0098.g74.t1 in Acropora microphthalma

Genomic Location: sc0000098_pilon:1543750...1548941
NR annotation: XP_029180413.2, mitochondrial carnitine/acylcarnitine carrier protein-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Z2Z6	Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus OX=10090 GN=Slc25a20 PE=1 SV=1
O43772	Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens OX=9606 GN=SLC25A20 PE=1 SV=1
P97521	Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000470 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR050567 all species →	Family	Mitochondrial Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45624 all species →	MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005740 all species →	Cellular Component	mitochondrial envelope	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0006839 all species →	Biological Process	mitochondrial transport	Interproscan
GO:0015227 all species →	Molecular Function	acyl carnitine transmembrane transporter activity	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:1902603 all species →	Biological Process	carnitine transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15109	SLC25A20_29, CACT, CACL, CRC1; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.