Genomic Location: sc0000099_pilon:1557769...1579834
NR annotation: XP_029190502.2, LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families
| CDS |
| amic_s0099.g107.t3 |
| Transcript |
| amic_s0099.g107.t3 |
| Protein |
| amic_s0099.g107.t3 |
| UniProt accession | Description |
|---|---|
| E7FAM5 | E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1 |
| D2GXS7 | Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca OX=9646 GN=TRIM2 PE=3 SV=1 |
| F6QEU4 | E3 ubiquitin-protein ligase TRIM71 OS=Xenopus tropicalis OX=8364 GN=trim71 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000442 (this species only) |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00630 all species → | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| PF00643 all species → | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF01436 all species → | NHL | NHL repeat | Repeat | Interproscan |
| PF13445 all species → | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017868 all species → | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR000315 all species → | Domain | B-box-type zinc finger | Interproscan |
| IPR047153 all species → | Family | TRIM45/56/19 | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR001258 all species → | Repeat | NHL repeat | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR011042 all species → | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR014756 all species → | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR001298 all species → | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR003649 all species → | Domain | B-box, C-terminal | Interproscan |
| IPR027370 all species → | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR25462 all species → | BONUS, ISOFORM C-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0006513 all species → | Biological Process | protein monoubiquitination | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
amic_s0099.g107.t3.
