Detailed information of amic_s0099.g121.t1 in Acropora microphthalma

Genomic Location: sc0000099_pilon:1649399...1656336
NR annotation: XP_015756495.1, PREDICTED: Bardet-Biedl syndrome 12 protein homolog [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SUD9Chaperonin-containing T-complex member BBS12 OS=Mus musculus OX=10090 GN=Bbs12 PE=3 SV=2
Q6ZW61Chaperonin-containing T-complex member BBS12 OS=Homo sapiens OX=9606 GN=BBS12 PE=1 SV=2
Q5RC62Chaperonin-containing T-complex member BBS12 OS=Pongo abelii OX=9601 GN=BBS12 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007301 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00118
all species →		Cpn60_TCP1TCP-1/cpn60 chaperonin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027413
all species →		Homologous_superfamilyGroEL-like equatorial domain superfamilyInterproscan
IPR027410
all species →		Homologous_superfamilyTCP-1-like chaperonin intermediate domain superfamilyInterproscan
IPR027409
all species →		Homologous_superfamilyGroEL-like apical domain superfamilyInterproscan
IPR002423
all species →		FamilyChaperonin Cpn60/GroEL/TCP-1 familyInterproscan
IPR042984
all species →		FamilyBardet-Biedl syndrome 12 proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46883
all species →		BARDET-BIEDL SYNDROME 12 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0045494
all species →		Biological Processphotoreceptor cell maintenanceInterproscan
GO:0051131
all species →		Biological Processchaperone-mediated protein complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0099.g121.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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