Detailed information of amic_s0099.g140.t1 in Acropora microphthalma

Genomic Location: sc0000099_pilon:1829095...1840700
NR annotation: XP_015772250.1, PREDICTED: transient receptor potential cation channel subfamily M member 2-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7T1N0Transient receptor potential cation channel subfamily M member-like 2 OS=Nematostella vectensis OX=45351 GN=TRPM2 PE=1 SV=1
O94759Transient receptor potential cation channel subfamily M member 2 OS=Homo sapiens OX=9606 GN=TRPM2 PE=1 SV=2
A0A0R4IMY7Transient receptor potential cation channel subfamily M member 2 OS=Danio rerio OX=7955 GN=trpm2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0038971 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18139
all species →		LSDAT_eukSLOG in TRPMFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050927
all species →		FamilyTransient receptor potential cation channel MInterproscan
IPR041491
all species →		DomainTRPM, SLOG domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13800
all species →		TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005261
all species →		Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0070838
all species →		Biological Processmetal ion transportInterproscan
GO:0098655
all species →		Biological Processmonoatomic cation transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0099.g140.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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