Detailed information of amic_s0099.g2.t2 in Acropora microphthalma

Genomic Location: sc0000099_pilon:20668...50055
NR annotation: XP_044173456.1, nucleotide-binding oligomerization domain-containing protein 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C3VPR6Protein NLRC5 OS=Mus musculus OX=10090 GN=Nlrc5 PE=1 SV=2
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
D4A523NACHT, LRR and PYD domains-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Nlrp3 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →
NACHTNACHT domainDomainInterproscan
PF13516
all species →
LRR_6Leucine Rich repeatRepeatInterproscan
PF07885
all species →
Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007111
all species →
DomainNACHT nucleoside triphosphataseInterproscan
IPR003280
all species →
FamilyTwo pore domain potassium channelInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR013099
all species →
DomainPotassium channel domainInterproscan
IPR050637
all species →
FamilyNLRP family, innate immunity and inflammation regulatorsInterproscan
IPR038359
all species →
Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45690
all species →
NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005267
all species →
Molecular Functionpotassium channel activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0071805
all species →
Biological Processpotassium ion transmembrane transportInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0099.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP