Detailed information of amic_s0099.g26.t1 in Acropora microphthalma

Genomic Location: sc0000099_pilon:423423...426695
NR annotation: XP_015774347.1, PREDICTED: elongation factor 1-beta-like, partial [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9YGQ1Elongation factor 1-beta OS=Gallus gallus OX=9031 GN=EEF1B PE=2 SV=3
P24534Elongation factor 1-beta OS=Homo sapiens OX=9606 GN=EEF1B2 PE=1 SV=3
O70251Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001854 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00736
all species →		EF1_GNEEF-1 guanine nucleotide exchange domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036219
all species →		Homologous_superfamilyTranslation elongation factor eEF-1beta-like superfamilyInterproscan
IPR014038
all species →		DomainTranslation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainInterproscan
IPR001326
all species →		Conserved_siteTranslation elongation factor EF1B, beta/delta chains, conserved siteInterproscan
IPR049720
all species →		FamilyTranslation elongation factor EF1B, beta/delta subunitInterproscan
IPR014717
all species →		Homologous_superfamilyTranslation elongation factor EF1B/small ribosomal subunit protein bS6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11595
all species →		EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003746
all species →		Molecular Functiontranslation elongation factor activityInterproscan
GO:0006414
all species →		Biological Processtranslational elongationInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0005853
all species →		Cellular Componenteukaryotic translation elongation factor 1 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03232EEF1B; elongation factor 1-beta-Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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