Gene detail

Detailed information of amic_s0099.g67.t1 in Acropora microphthalma

Genomic Location: sc0000099_pilon:1095510...1106422
NR annotation: XP_015774951.1, PREDICTED: 5'-AMP-activated protein kinase subunit gamma-1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0099.g67.t1

ttttatagaaatgctaattagaacaaagatgaaagaacagtcaattggcagccatttatgcattcggtgtataCAAAGTGGGCTACGGAAACAGAAAGCTGAAAGAAAGAGTTGTGCGCATTTCCGTGAAATGCGAAGGAACGCATCAAGTTCATGAAGTTTTGGAGACACAAGATAACGGTTTGAGTTCACATCACAGTTCTGACATACTGACAAGGTCTTTTAGATTTATTAACATGTTATCCGATGAATGAAATTTGGTCCAACTTTATGAAACTGCCCCTTTAAGTTTTCTTTTGTCCTTTTCGGCATTAGGTTTCACACTTTTAGTCGTACAGTTTTCTGGACTTTGTCTCCAGTTTTAGTTTATATCCTGTTTATAATGCAGCGTGCATCGCGCTATTAGAAGTTACCCTTTGTTATAACAGTGCAAACAGGAACCAAATCGATCTGCAATTGACGAGAGGTCGTTGCCGAGTACACCAGTCACCTTCTGTTTAAATTCATGGTCGAAAACTGTAATAAGGAGTTTGCAAAGCTTTCTTTTCCTATTAGCAAGATGAAAGTAGTATAGAAGTGCCGAACTGAAGGTTTTATATGATGTCCAATCATTCTTTTACTGCAATGGAAATGAATGTCGATAAGGAACAGCGTGGAAGCATTGGTTCAGACAGGATGTGGAGAAGTGTTGAAATGGAGAACCTTCACCTTGATGATGACCTGGCCTCCTTTGCAATACCCTGTAATAACTACCCAGAATCTTATGAATCAACACCAGATGGTTTACCAAAAGAACAGCAGACATCACGGGAATGGGTACTAGAATGGAACAGAAAGAGTGACACAAGTGAAGTTCAAGAATACTTGCAACAAATGCAGCGTTCCCACAGCCATTCACAACCAGACTCTAATGGTGATCCATCGTCAGAGGGTTTTAATCGAAGCAGCTCTGTGCCAAGGTACGGAACATATGATGGACAAGATGAAGAGATGGAGAGCGAACCCTTCCAAAACTTATCTTGTTCACCAAGTAGAAAAATTCTTGAGGTGCAAACTGTTGGAGAAGTCACTTCTGGTAATGGCATTGAGGATGATGAAAGAAGAGATCAAAATGATTATGCTGAGGTAGTAGCAGACCAGGAAGAAATTCTGTTGGATGAAGCTATGGCAGAGGAGAGAGGCGAGAGCTACATGTATACCAACTTCTTAAAATCTAGAACATGTTACGACATCATGCCAAAGAGTTCCAAGATTGTAGTGTTCGACACCAAGCTCAGGGCTAAAAAGGCCTTCTTTGGACTTGTTGCTAATGGTGTTCGGTCAGCTCCACTTTGGGATAGCGATAATCATGCTTTTGTTGGAATGCTGACTATATCAGACTTCATCAACATTCTTCGATATTATTACAAGTCTCCATTGGTTCAAATGGATGAGTTAGAAGATAACAAAATTGAAACTTTTAGAGAATTGCAGCATTCTAATGTGAAACCTGGCCTCATAAAGATTGCCCCAATGCAAAGTTTATTTGATGCTGTGAAGATGTTGGTGGAGCATAGAATTCATCGTCTTCCTGTTGTGGATCCAAGCACTGGAAATGCGCTTTACATCTTGACACACAAAAGAATCCTACGATTCATGTTTTCCATGGTAAGTTGATGATCACTGCTGATGTTGTTGTTGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAACCCAAACTCATGCACCTGATTTCATGGGAAGCACTTTGAAGGAATTAGGTCTTGGAACATATCAAAATGTTGCTATGATATCTCCTGAGACCCCACTAATCAAAGCTTTCCACCTTTTTGCTGAGAAGAGGGTTTCTGCTTTACCAGTTGTAGACAACAGAGGTGTTGTGGTGGATATTTATGCAAGATTTGATGTTATAAATTTGGCTGCTGAAAAGACATACAACAATTTAGATGTGACAGTCAAGCAGGCCCTACAGCATAGGGCGGAGGGATTTGAAGGAGTTCACAGGTGTTATGTAGATGAAACCCTTCATACAATAATTGACCGTTTGACAGATGCAGGAGTCCATCGTTTGGTCGTAGTCGATAAAGAAGATCGGTGCATAGGAGTGTTATCCTTATCAGATATTCTCAAGTTCTTAGTCCTACGACCTGTTGCCTCCAAGTAAAATGAACACATGATACAGCACCTGAAGAAACACAAGGGCTTGTCATCAAAAAGATAAACAAAGTGACTTTTCTCTCATGAGAGGGGATGTTTTTAAAGTAATGGCATCTTAAAGTAAATGGGAATTGTGAGATGTCAGCAACAAAGCTGGGAATGCTTGATTAGGTGTGTTCTGGAATTACGAATGAAGTGGTTTAATCGTATTCAGACCATTGATTCCTGTCAGAAACACATGAAGCTTTTATAAAGTCAGACTGAGGGACTGTTTGCTCTGCCATTCAAACATTATAATAATAATTTATTAATTTAATTTTGCTTCTTCCCTGTACTTGGTGTGGAATCGATACTTCATTGTGTGACTGAGTTGCATGTGCGATAATTTGGTGCATGTAAGTTTGTTTGAGAAATGGCCGTAAGTCTTTTAGGTAGTGCCATAAATTCAAACTAGAATAATCATATCATGGGTATTACTGGATGCATGCAATTGAACAAAAAATCATGGAGAAGAATGGGTAAAAAAGTCACAATATTGGTTTGTTTTAGCCTTCAACTTGTTGCTTGAGAATGCAGAAAGAAACGAGTGGAATTAGATACCAACTGGGATCTGTCTGAGTAAACTACGCATACATGTGTAATGGCTTGTGAGTAGGGATTGGGTTAAGGCACTCATGGAGTATACTAATTATATTCCATACCATTTTTCTATTTTTACTATCCGGGAGGAAAGGGTTTTATGAGTTTCCTGAGCAAAGTGACAAGGTCAAAATTGTTTTTCAGTTACTTGATTAGTGCACTTCGCTTAATTGGCATCCATTTTATAGTTTCATGCTACGTTACTAGGGGATGAAAACTTAAGCCACAACCAAAATTCAGTATTCTTACATTGAATTGGCCAAGTCTGTAAACAAGGGTGTAATATTTCTGTATCTCCAGACAGGGTTTTTTAAAAATATTTTTAAAGCTTGGTCAGTACTGTGAAAAACTTTAAGTTAGGGATGTTTATTTCTGTAAAATAGTTTAAGGACTGTGTGCAAGCGACTTTAAATTTAAATTTAACATTGAGCCTTCAGCAAATGATTGGCAATATGGTCACTGCAAAAAATCGAACAAGAAACTATTTTACCTTCTTTTCACACAGCAGTGTACTTGGCAAATTGTCATTTGAAGAAAGAAAATGACCATGTCTGATTTGTTGGCATGCAGTCCTTGAATTTTCTGCTCAGACTCTGGGATTTGTAATTTGTGTGGAATAAAGTTAATATTTTTAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91WG5	5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus OX=10090 GN=Prkag2 PE=1 SV=2
Q9UGJ0	5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens OX=9606 GN=PRKAG2 PE=1 SV=1
Q5R4S0	5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii OX=9601 GN=PRKAG2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003784 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00571 all species →	CBS	CBS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046342 all species →	Homologous_superfamily	CBS domain superfamily	Interproscan
IPR000644 all species →	Domain	CBS domain	Interproscan
IPR050511 all species →	Family	AMP-activated protein kinase gamma/SDS23 families	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13780 all species →	AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016208 all species →	Molecular Function	AMP binding	Interproscan
GO:0019887 all species →	Molecular Function	protein kinase regulator activity	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0031588 all species →	Cellular Component	nucleotide-activated protein kinase complex	Interproscan
GO:0050790 all species →	Biological Process	regulation of catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0099.g67.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.