Detailed information of amic_s0100.g5.t1 in Acropora microphthalma

Genomic Location: sc0000100_pilon:55537...65175
NR annotation: XP_015747308.1, PREDICTED: YTH domain-containing protein 1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R7463'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2
B2RR833'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1
Q9H6S03'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003194 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04146
all species →		YTHYT521-B-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007275
all species →		DomainYTH domainInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0100.g5.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0100.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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