Gene detail

Detailed information of amic_s0101.g22.t2 in Acropora microphthalma

Genomic Location: sc0000101_pilon:277820...281395
NR annotation: XP_029212129.2, carnosine N-methyltransferase-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0101.g22.t2

CATTAACATGCACTACTTACAATAATTTTTTTTTTTTTAAGAAAAGCAAGGAACCTAAACAAGAAAAGGTCAAATTGACGTTAGAAACTTGTTCAAAAACGACATGTTAGTCCTTGTTAACCTTTTCTCAGCCAATGAGCAGCTACAGATTTTGCCCTGACTGGAACAATGTTATGGGATTTTGCTTGTCAATGGAGAACTTTGCAGTAGTGGAGGGGAGGTAGATCAAGAATGAGGAACCAACAAACTCCACATGATCAGGAGAGAAGAGTGAGAGCCCTAACTTGGCATAAAGCCAATGAAGCTGAACCTTTCTCTCCTAAAGTCATTGCATGTTAAGTCTGTTTGTATGTTTTTTATTTGTACTTTTTTCAGTTCAAGGAAGGACATATCTATTCTCGTTCCAGGGGCTGGACTGGGGAGACTGATGTTTGATATTGCCAAGCTGGGCTTTATGTGTCAGGGGAATGAATGGAGCCTGTACATGCTATTTGCTTCGCATTTTGTATTGAACAGAGCTCCAGGAACGTACCACACTACAATCTATCCATATGTACATCAAACATGTAACAACAAGTCAACAGCTGATCAAGTGCGACCAGTTAGTATCCCTGATGTTGATCCAACAGATGTTCCATCAGGTCTGAACTTTTCAATGGCTGCCGGAGATTTTCTTGAAGTTTATACTGAGAAAGATTGCTGGGACTGTGTAGTGACGTGTTATTTTATTGACACAGCTCACAATGTTATCGCTTACATAGAAAATATCGCCAAAATATTAAAACCTGGTGGATACTGGATCAACTTTGGTAATCATAATTTCTTCTCTCTTAATTTGAACTGAAACATGTTTAAATATTAAATACACAGGAAATTGCTGAAGGATTGGTCCAAGCCACTGAGCGACAACGGACTGACAGACGTGATAACTACTGAAAAAATAGGGTTGATGCAATATACTAACGAATTTGTTAACCTGGGCAATCTTACTGTTATTTAGACCGGGTTATCGTTGGCCCGGAGACAGTGGATGTGCAGTGGAAGGGGACAAAAAGGATTCGTCTTATTGGAGTCAGTTAAAGAAAAAAAAATTAATCGCATGTTTTGATTCCTCACTGACGGTCACAACGACCTCAAGCTTCTTGTTGACAGCCGACTCGTCCTGATTTGGTCATTGTTGGGCCATTGTTGTATCATTTTTCTGACATGGCAAATGAGTGGTCAGTGGAATTATCCTATGAAGATATAAAACGCATAAGTACCGACTATTTCAAATTTGACATAATTAAAGAAGTGACGAGTATCCCATCAGGGTACATCGAGAATGAACGTTCTATGCTTAAACTTCTCTACGATAACGTGTTCTTTGTGGCGCGAAAGCCTCTATGAGAGAGCAAAATAGGTCAAGTGGATCTATTTGTTCCTCGCTGTCCATTCCTCCCTTTCTCACGTGCAGATAACTGTCGTAGACTGACAACGTAATGTGGTTTGGTGTTTCTCCTGATTCTTGTGGATGTCGGACTGGACTGGATGGGACGTCTTCATCAATTTCAGAGTGCCCAAGTGGCAATTCCAATGACTATCAAAGAAATTCTACTTACTAAAGAAACTAATTTGAAATTTTATGGGCTTTTGCGTGGATGTCAAAGTAACTTTTAAAAGAGGCCCGTTGAATCATTCAATGCAGTGCacaaaaaaacaaacaaatgtaaaacaaaACAGTAAAACAGGCTCTTTGCCCTCGCATCTTTAATCTTGTTGCGAGTGGTTCAAAAGTTTGTGAATACAGCAATAAAGTCGCTAAAAGTACTTTAGAAGCAATGTCCGCAACAGCAAAGAAATTGAAGGGATTGGGTTTTTTGTTGTTGTCATTATCATTGTTTTAAACGATTGCATCCTTGTCGCTTATAACAACTATTTGAAGTCAGTTTATAAAGTGAAGTTTCCAGCACTTTGTAAACACCATACTTGATTCCTCTTTCTTGAAAACCAACATTAATAAGGGTTTTCATAAATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F1N9S8	Carnosine N-methyltransferase OS=Gallus gallus OX=9031 GN=CARNMT1 PE=1 SV=2
Q8N4J0	Carnosine N-methyltransferase OS=Homo sapiens OX=9606 GN=CARNMT1 PE=1 SV=1
Q80UY1	Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006476 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07942 all species →	CARME	Carnosine N-methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR012901 all species →	Family	Carnosine N-methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12303 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0008757 all species →	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan
GO:0030735 all species →	Molecular Function	carnosine N-methyltransferase activity	Interproscan
GO:0035498 all species →	Biological Process	carnosine metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0101.g22.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.