Detailed information of amic_s0101.g73.t2 in Acropora microphthalma

Genomic Location: sc0000101_pilon:1036710...1057779
NR annotation: XP_029187750.2, netrin receptor UNC5B-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7T2Z5Netrin receptor UNC5C OS=Gallus gallus OX=9031 GN=UNC5C PE=2 SV=1
Q761X5Netrin receptor UNC5C OS=Rattus norvegicus OX=10116 GN=Unc5c PE=1 SV=1
O08747Netrin receptor UNC5C OS=Mus musculus OX=10090 GN=Unc5c PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004837 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00791
all species →		ZU5ZU5 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000906
all species →		DomainZU5 domainInterproscan
IPR037936
all species →		FamilyNetrin receptor UNC5Interproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR003410
all species →		DomainHYR domainInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12582
all species →		NETRIN RECEPTOR UNC5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005042
all species →		Molecular Functionnetrin receptor activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0038007
all species →		Biological Processnetrin-activated signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0101.g73.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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