Detailed information of amic_s0101.g80.t1 in Acropora microphthalma

Genomic Location: sc0000101_pilon:1128470...1148223
NR annotation: XP_029187686.2, TBC1 domain family member 9B-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZT07TBC1 domain family member 9 OS=Homo sapiens OX=9606 GN=TBC1D9 PE=1 SV=2
Q3UYK3TBC1 domain family member 9 OS=Mus musculus OX=10090 GN=Tbc1d9 PE=2 SV=2
Q66K14TBC1 domain family member 9B OS=Homo sapiens OX=9606 GN=TBC1D9B PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003146 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02893
all species →		GRAMGRAM domainDomainInterproscan
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR004182
all species →		DomainGRAM domainInterproscan
IPR036017
all species →		DomainTCB1D9/TCB1D9B, PH-GRAM domain 2Interproscan
IPR036014
all species →		DomainTCB1D9/TCB1D9B, PH-GRAM domain 1Interproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47666
all species →		PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTICInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19951TBC1D8_9; TBC1 domain family member 8/9-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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