Detailed information of amic_s0101.g84.t1 in Acropora microphthalma

Genomic Location: sc0000101_pilon:1170414...1193749
NR annotation: XP_029187687.2, TPR repeat-containing protein DDB_G0287407-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O08653Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1
Q99973Telomerase protein component 1 OS=Homo sapiens OX=9606 GN=TEP1 PE=1 SV=2
P97499Telomerase protein component 1 OS=Mus musculus OX=10090 GN=Tep1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001124 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13191
all species →
AAA_16AAA ATPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041664
all species →
DomainOrc1-like, AAA ATPase domainInterproscan
IPR051191
all species →
FamilyDDB1-CUL4-associated factor 12Interproscan
IPR007111
all species →
DomainNACHT nucleoside triphosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19860
all species →
DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0080008
all species →
Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0101.g84.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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