Gene detail

Detailed information of amic_s0102.g119.t1 in Acropora microphthalma

Genomic Location: sc0000102_pilon:1621484...1638491
NR annotation: XP_044172882.1, heat shock 70 kDa protein 14-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0102.g119.t1

CTTAGGAATGTCTTCTCTCCACTTCTCTTTCTGGGCAAATGTAACATAGTAATGATAGGATAGGATGGGTACTTTTTCCGGTGACATTTTGTCATCTGGGAGGTGGGTGACCTGTGAAAAGTCCGAGAGGGAATTGGCAATTAGTCATACCCAGGTTTTCTCCGGCTTAATAACTTTTGAGCAAGATGGTTGTCTCACTTGGCGTTCATTTGGGTGGCACAAGTGCATCTCTGGCCTTGTGCGAGGATGGTAGAACAGAGATTATAGCTAATGATGTCGGAGATAGAGTTACTCCTGCTTTGGTGGCATGTGTTGGAAGAGAAAAGACAGTCGGCCTCCCTGCTAAGCATGGTCTTATTCGAAATTCAAAAAACACTATGGCTAGGGCAAGCAAGTTAATTGGATTAAGGTTTTCTGATGATGCAGTTCAGCAAGAAGTTGAAATGTGTGAATGCAAGATCATCGAAAAGGATGGAGAACCCTTTTTTGAGGTGGAAATGAATGAGAAACCAATTTATTTTTCTCCCAAAGACGTTCTCAAGATCATTTTCGACAAATTGTTAGAGATTGCTCAAGCTAATGGTGGAAATGACATTGATGAAGCTGTCATCACAGTACCCTTTCATTTTAATGATAAACAACGGACTGCCACAAGAGAGGCAGCTGAAGATGCAGGCTTCAATGTTCTTCGTGTTATCAGTCAACCATCTGCAGCAGCTCTTGCATATGAGATTGGACAGAATGATCGCACTATCAGAAGAACAGTGCTCGTGTATAGATTGGGAGGAACATCATGTGATGTTACCATCATTTCTGTAAATGGAGGAATGTACAGAGTTGTAGCTGTCGAGAATGATGCCAGCTTGGGTGGAATAAAATTTGACGAATTACTTGCTCAACATCTCGCTTCAGAGTTtaaaaaGCAGTGGCAGCAAGATGTTACAAGCAATACCAGGGCGATGGCCAAACTAAAAGCAAGTGCAGAAACTTGTAAACATGTTCTGTCGTCCAGAGATACTGCAACCTGTGCAATTGAGTCTCTTTATGGTGGGGTTGACTTGAACAGCAAAGTTTCAAGGGCTCGATTTGAATCGCTTTGTTTAAGTTTATTTCAACAAAGTCTTGCCGCAATTGACAGAGTACTCACCAAAGCCAGAGTTTCAAAAGAGAATATTGACCAGGTTATCTTAGTTGGTGGCTCAGCTCGCATTCCCAGGATACAACAGTTAGTGCAAGAATATTTTGTGGATAAAGAGGTGTTACACTCCATTAATCCAGATGGAGTGTTGGCTTATGGAGCTGCTATTCAGGCCTCTTTGCTTCAAGGTCGGGAAGACGAATTAAATAACGATGAAGATGAAGTAGAGTGTACATCTAAAACTATAAGTGTCGAGCTTGACGACTCCGAGTCACTCATGTGTCCGATTATTCATAAATACTCACCCATTCCCACTAGGACAACACACACTTTTACAACCGCAGCCGATAATCAGGAGACTGTCCGTTTGTGTGTATATGAAGTAGACGAAGAGGACATTCCTGGGGGATGTGGAAGGAATCTTGTCGCAAAGGTTGTTCTTGAAGGAATTCCTCCAATGGCAAAAGGACAAGCGAATATTGTCGGGACTTTTCATGTCAGAAGGGATGGTTCTCTTCACATTCATTTGGTGGAAACGACGTCTCAGAAATCCGCCGATATGACTGTTGACTCCATATAGCTGATTAGCTTGTACAGAATTTAGGAAATTAAATTTTATCTTTGGTTATGCACTGAGACAATGCCGTTGTTATTTTTATGGCTTTACTTTTCGATACATAACGCGTACAGTAAACGGGGCATAACAGTTTGTTGAGTCGGTGTTGCTTGAGAAAAGTCAACGCTTGCAACCTTGGCCAGTGTCGATTTTTGCAGTTTTAAGAAGAGTGAACCACTCTTGGAATTTATTATCTTTACTGCTGTTGGTGTTGCTTTTTAACTTTTTTTGATTTTTTGATCGGGTTTTTGTCAAAAAGCCCAATCTACCTTTGAGGAAACGAATGTACGTATCTCAACAAATCCGAGTTGTTTCTTTATTTTAGTAAAGGTTGTAGTAACTAAACATCTCAGAATTCATCCTTTGTGAGGGCAATTTTTAATGTGTCTCAGACTCTTTTTTAACGGTCGTTGTTCTCTGTTCATAAAAATCCGCTCAGAAAAGCAAAACCCGCGTAGAATTCAAACGGAACTAAAACTCAACCGGAGCAAGGAGATTTTAggccgcttacactacggaaaaattgggtacagacccgacaagaaaagagtgcggacctcacatttttgcctgtggatcatgtcttttggcatgggtgaggaccggtgttgttttcggttttggggccatagacatctatggccccaaaaccaaaaaaagacgggtccggaccagtttcttgattcttacgtcagcttgcgtaataatttcgctaattgcatgcgcagtgtcgtagactcacattaaaaagaggtccggaccccaaagtgtgtggtgtaaacgcaatcttgtaaacttagtccttagcccactttttgtccgacctatggtaaattgttatccgtgtaaacaggctaaagttatgcggtccgtatctgtctttacaagtgtccggacccaattttctgtcttgtaaatgggTCTAAAAGTTCCAATGCTGCAGTCAGACCAAATCTATTTTTCTTTGAAGAAATGTCATTTGATTACTTGAAATAAGATAAATGGATTTAACTTTGAGCCGCCATTGACTACTGATTGTCAACACATTCACCCAATAAGTTCATTTTCGAGAAATAAACAATAATGACTTCCTTTGTTTCAAGATTTATGTCGCCAAGAAGTCAATTTTCCCTGCACGAGGGAGAGTTAGGTGAAATCATCACCCACTGAGGTGGATCGTGTTAAACCATTTCAAACAACATAATGACTGTCATGTCTTTTATTTTATCGTTTTGCGATGAATTAAATTCATAATTTTTGTAGTTATTACTCTGTAACTTTTCAGCTGACCTAGTGTGCGGATTTTTTGCTTACGCACCCACACTTAAAGGTATTTTGAGACGGCTCTAATAATTATAGAATAACATGATATACAGTAAGTTTAATTTATCAACAACTTAATTCTCACTTTAGTTGTTTATTTGTTTCATGTTTCGCATCCGTAAGCAAATCCATTTTTTTCGACTTGTACCTGACCGGAAGTCGAGATGTTTGTCGCTAGTCCTTCATTTCCGCCTTCAAATCCTCCATATTCAATAAATTCGTGAAGTTAATAAAGTGGGCAAACCTCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RGE6	Heat shock 70 kDa protein 14 OS=Danio rerio OX=7955 GN=hspa14 PE=2 SV=1
A2VD93	Heat shock 70 kDa protein 14-B OS=Xenopus laevis OX=8355 GN=hspa14-b PE=2 SV=1
A5D8N7	Heat shock 70 kDa protein 14-A OS=Xenopus laevis OX=8355 GN=hspa14-a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000450 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012 all species →	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR029047 all species →	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR013126 all species →	Family	Heat shock protein 70 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375 all species →	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0102.g119.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.