Detailed information of amic_s0102.g45.t1 in Acropora microphthalma

Genomic Location: sc0000102_pilon:628319...640091
NR annotation: XP_029193886.2, 26S proteasome non-ATPase regulatory subunit 13-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UNM626S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens OX=9606 GN=PSMD13 PE=1 SV=2
Q5E96426S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus OX=9913 GN=PSMD13 PE=2 SV=1
P8416926S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus OX=9031 GN=PSMD13 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007337 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01399
all species →		PCIPCI domainDomainInterproscan
PF18261
all species →		Rpn9_CRpn9 C-terminal helixFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR035298
all species →		Family26S Proteasome non-ATPase regulatory subunit 13Interproscan
IPR040798
all species →		DomainRpn9, C-terminal helixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10539
all species →		26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008541
all species →		Cellular Componentproteasome regulatory particle, lid subcomplexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0102.g45.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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