Gene detail

Detailed information of amic_s0102.g5.t1 in Acropora microphthalma

Genomic Location: sc0000102_pilon:30200...35905
NR annotation: XP_029193880.2, acyloxyacyl hydrolase-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0102.g5.t1

GTGTGGCATCGCGTGATCACCTGATTACCTGCGTAAATAAAAACGGTGTTCACGGGTCAAGACCTGTGTTTATTTCAAGAGAACACCGATTTCGATGTCATTCACATTGGCAGAATATTATCTGAGCCTCACTTCATAATTATTCAGTCCGTGGCTGTAGTTTATTTAAGTGCAAGCCGGCCCTAACATGTCGCTGGTTTCTTACTTTAATCCGTTCGTTTTGTTCCTTTTGCTTTGTTCATCTCCTAGCTACGGTAGTGCTTCAGATAACGTCCTCTACACCTTACCAAAAGGAGTCAATGGTGGCTATGGTTGTCTTGCCTGCACTGCTGTAGTTGCCATCACAGAACAGCTAAGCATCATTCACAACGAGACATTCGTCAAATCGTACTCCAGGCTTTGCGACGTTCTTCCGAAACTTTACAGAGAGGCTTGCATTTCGCTTGGAAAGTTCTACATTCCTCTAGTTATTGACCTACTGACCGAGGAAGTATCTGCAGATGTTATTTGCAATGCAATTTTCCTATGTTATCAAGAGAAGGGGCAGCCATATTGTCACGCTTTTCCACCAAAGGAACATTTCGCTGCCAAAGTTTTAAAATACAGGAAGAAGGTTTGGTCGAAAGTGTTCGACGAAACCAAAACTTTTTATGGATCGAAGCCACCCACAAGTTTCGATCCTTGTACCCTTGCTGGAGTGTGGGAGCTCTGCGTTTTGTTTGCTCGTGTGTTCAGCAATGATTTGCCTCTTTTAGACTTAGACAATGACACCTATAGCGCTCTTCTTGAATCGTGGAGGGGTTCCTCCTGGAGAGGTCGTGATTGTGATGATATTAATAGCTTTCATCATCCAGGTGCCAAGCCAAGAAATGGCGATGTTATCTATGACTCCAACTGCAATGGTATTTCTGGTATACATCCAAATGGAATGCCATATGAAGGCCTGTTTTGCAACGGAACTGGCAATCTTGGTGTGATTGTGATTGGCGATTCTGTGGCGGGACATTTCCATATTCCGCCTGAGTGGCTGACAGCACACTTCTTTTCTGAGAAGATCTTCAAAAATGCTGCCTTCATTGTAGAAAATGAATTTGATTGGCCTCAGCTGTCTCTGTATTCTGGCTACTTGAGAAAGTCACGGTGGCCGATGGAAAGAGGCCACAGTGATTCCATTTATCTTAAACTCTGGGAAAGAAACCACTGCAATCACAGAGATTACCAAAATCTAGCCAAGAATGGGGCGGACTCCTTTGAGGCAAACTCCAGACTGCTTCCAAGCATGGCTCGGTCCCGGGAACAGGATCAACCAGCACTGGTGTTCTATTCTCTTATTGGTAATGACGTGTGCCATCATGTACACAATCTCAGTGCAATGACCACTCCACAAGAGATGCGCCAAAATGTTCTCAAAACATTGCACACTTTGGACAAGAGGTTGCCAAATGGAAGTCATGTTATTCTCATAGGTTTGGTGGATGGTCGCATCCTTTTTAATAGTCTCCACAATCGCATTCATCCTATTGGCAAATTAAGGGGAGATGTGACCTATGAACAGTTGTATGATTTTCTAAACTGTCTACACGTTTCTCCGTGCTATGGATGGTTGAATTCTAATGAGTCAATAAGAAATGCAACATCAGAACGTGCAGAACAGTTGACAGCTGTCCTACAAGCAGTAGCAGAAAAATCAAAATTTGAGAACTTTGATTTGTTTTTCCTTGAGTGCCCAATCAAAGAGGTCATAAAGGAGTGGGTCCGCAAAGGGGGCAAAGTTTATGAACTGATTGAACCAGTTGATGGATTCCACCCTACTATGGAAACAGAGGCACTGATGGCAAATACGCTCTGGAAAATTCTGGAGTCAAAGATTCCCCATGTAATTGGACGCGTCAACCCCTACAATCTTCATATAGAACGAGTATTTGGAAATCAAGGTGGTTATTGAAGGTGAAATTTGTCATCTTTTATATCAGCCTCTTACACATGTGTGCTATCTGTCATAAGCAATAATAAgcaatcatgcgattttgcgttgaatttggaaataaaaatttgcacaagtgggtttttcaaaaagtaacagaattgcaggagcccgtgggacgaatgcaaatttgagctttttgaaagacacacgagtgcagattatctccaaatttaacgagagaaatcgtatgagtactttttgataataaacatgacaaaaTTATAGAGGAAGTTGCGGTTCGGAAGTGACGCACGTGTCATCAAGTTTCAAGCATCGaaagaaaagatttggttgattcttactaaagcctattgtttagtcggcaatcaaaagcgagaattctttgagtaaattgtactcagttactatttttgcactgaattaactatttttcgtactgtttttacaaaaaaacggcactgctgtcaggtaatcagaatcgaataattttgtcatttatattaATAATGAAGAAACTCAGAGGTTTAAAAGGGTTAATTTAAAATTATTCTAAGAATATCCATGTGTTTCGACATTGTATCAAGGATGAATGAAGCGCGTGATCCTCGCTGTTTTTTTTGGGGGGGGGGGTGGGgctacttatgtagtaacgaggagacaaatttaggcctaactgacgggattctaacccagacccctgcgatgccagtgcagtgctaccagttgcgctttcaggccaactgggagctgctcgttatgtgggtcgattaagcccgtagaggatgggtgtcgatctatatatacatacacgactttcatgcatCAACAAAATCATACAAAATTGTAGTAATTTGTTATAGTAAATTTTTATAAATTTGTGGTAAACTAATTTTAAGAAATTGGAAAAGATTTATTTAATTTCATTTGGTGGCTCAATTTGGACACGATTGTTGTCAAATTCAGTTGTAACGGGTGAATTCTCGGAGATGCGGTGTCATTTACTGCGCATATTAACCAACAGTTTCCTTTCCTTTCCTATCACTGCGAGTCGTATTTTGGGGATGTGGGTTGCGTTTAGCTTGACTGGATTCGATTGTGAAATCTATATACGATTCAGTTCTTGAACTTTTTTCGCTTCTTCTCAAATCAGAAGAAACTTTGATAAACTGATTGTAATGATTCTGACAGCTGTAGTCTTTTATGGCTGCAGTAAAGAAGTCCCTATTGTTAGTTACTTTTCTTTAGCAGTTACTACGTTTCAACTCGAACTGTACATTCAAATACAACTCAAAGGTCGTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P28039	Acyloxyacyl hydrolase OS=Homo sapiens OX=9606 GN=AOAH PE=1 SV=1
O35298	Acyloxyacyl hydrolase OS=Mus musculus OX=10090 GN=Aoah PE=1 SV=1
O18823	Acyloxyacyl hydrolase OS=Oryctolagus cuniculus OX=9986 GN=AOAH PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009368 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00657 all species →	Lipase_GDSL	GDSL-like Lipase/Acylhydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036514 all species →	Homologous_superfamily	SGNH hydrolase superfamily	Interproscan
IPR039676 all species →	Family	Acyloxyacyl hydrolase	Interproscan
IPR001087 all species →	Family	GDSL lipase/esterase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15010 all species →	ACYLOXYACYL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0009104 all species →	Biological Process	lipopolysaccharide catabolic process	Interproscan
GO:0050528 all species →	Molecular Function	acyloxyacyl hydrolase activity	Interproscan
GO:0050728 all species →	Biological Process	negative regulation of inflammatory response	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0102.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.