Detailed information of amic_s0103.g61.t1 in Acropora microphthalma

Genomic Location: sc0000103_pilon:846074...853729
NR annotation: XP_015754470.1, PREDICTED: protein SDE2 homolog [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q12874Splicing factor 3A subunit 3 OS=Homo sapiens OX=9606 GN=SF3A3 PE=1 SV=1
Q9D554Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2
Q6NRI5Splicing regulator SDE2 OS=Xenopus laevis OX=8355 GN=sde2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005684 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13297
all species →		SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025086
all species →		DomainSDE2-like, C-terminal domainInterproscan
IPR051421
all species →		FamilyRNA Processing and DNA Damage Response RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786
all species →		SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0103.g61.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP