Gene detail

Detailed information of amic_s0103.g77.t1 in Acropora microphthalma

Genomic Location: sc0000103_pilon:976468...977601
NR annotation: XP_029191162.1, heat shock protein beta-2-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P82147	Protein lethal(2)essential for life OS=Drosophila melanogaster OX=7227 GN=l(2)efl PE=1 SV=1
P02513	Heat shock protein Hsp-16.48/Hsp-16.49 OS=Caenorhabditis elegans OX=6239 GN=hsp-16.48 PE=2 SV=1
P06581	Heat shock protein Hsp-16.41 OS=Caenorhabditis elegans OX=6239 GN=hsp-16.41 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000649 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00011 all species →	HSP20	Hsp20/alpha crystallin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR002068 all species →	Domain	Alpha crystallin/Hsp20 domain	Interproscan
IPR001436 all species →	Family	Alpha crystallin/Small heat shock protein, animal type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45640 all species →	HEAT SHOCK PROTEIN HSP-12.2-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for amic_s0103.g77.t1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09542	CRYAB; crystallin, alpha B	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.