Gene detail

Detailed information of amic_s0106.g10.t1 in Acropora microphthalma

Genomic Location: sc0000106_pilon:239046...250704
NR annotation: XP_029208577.2, protein mono-ADP-ribosyltransferase PARP12-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0106.g10.t1

TTCGTTCGAAAATGAACTTTTGACTCGGTGAGTTCAATTGTAAGATCGTCACGAAGGTAAATGTTATTGTGAAAAGATATCTTTTTGTTGGAAAGATAATAGACAATGGCTTACAGTTCTTTGGTGTTAGCAAAGTACCGTTGAAAATGAGTGGTTTGCTGGACATGAACATCAGGGACCCTTGCTCACCCCATAATGTTTCTGGATGGGAAAGTGGCACATTTCAAGCAGATGATACCACATTATCTAAAATGCTTCCTGCTTGTGATGATGTAACTTTGAGCAAGCACTTGAGAATGCTTTGGGATGATCCTAACCTCAAATCAACGATAAACAACTTGCTTTTGGATCAAGACACTCCTGGATTGGATCAAGAAATAAGCATTGTTCCTGAGCATACTACCAGTTTTCAGAAAAGATGTGCAGTGAAACAGCAAACAGAAAGAGGCAGAGACACTTTGCAAATTGGAGCTGGAATTGACAAGCGTGTTGTGAGCATTGATATTGACAAAAGGAAAAATAGCAGTGTTTGTTCAAGTGCAGAAGTTGTGGAGAATTTGCAGTGTGGAAATAAAGGATTAGAAACTGATGATGAAGTTGTGTTTGTTAAAAGTGTTTCAAGCCCAGGGATACAACCATGTCGTAGGATGAGGTGTCCTAACTCAGGTCTAAGCTCAGAGAGTGAAGAAATTAGTATCTGCTTATGCCAAAAGGATGGAGCACCTCGCCCATCGAAGAAGAAAGCAAGAAAATCACCTATTGTGATAATTGATGATGACATAAATGATGGCATTTCTTATCAGTCACCAAAGAAAAGGACAAATTCAAGTTGTCGCCCTGTTGCCAGGGAGTCTTCCAGTGTCTGTGACAGATCAGCTTCTTCTATAACTGCAATATCTGATGAAGGTGGCAATGAATTCAGTGACGTTGTGGTATCTGGCTCCAAAAAGAATGCCACTGGAATCAATGAACCTGTGACTATTCCAGGAAATCAAGTGTCCACTTCTTCTTGTGTGCCTTGGGCAAACTCTTCTTTCCTCTATGACCTAGAAATTTTGAAAAAGGTTTTCCCTTGTGCTGATCCAGATAACGTTTGCTTTCTTTTGGACAAATATGCAGATCGATTTGATCGAGTAGCTCTTGTGGGAAAAGAGCTAGGAAGTATTCCCAACCCACGAGAGATGGTAAAGGTGCCAATGCTTTTTGTACCTTGGTTCTGGCAATTGGGGGGAGCCAGCATAAGTCCGTTTTCTGTTGTGGAAAGCATGGCTTTGGAAAAGGAGTATTCAACCAGATACTCAATGTGCTTTGGTGATACATGCGGCAATATCAAGCTTCCTGGTTCAGATGAAAGATATTATGTTGATTTTGCCACAATGACCATGATATGTGGCAAAGGACAGAAGACCAAGATTTTTCGAGGTCTTAGCTGCGATGAGGGAAGTATGGGGCCCAGTGGCAGGAAATTGGTACCGGAAGATTCCCTTGCAGTTCCCGCTAGCTGGGAGGAACAGACAAGGGACGTGGAGTTGATCAGTGTTTGTCCAGGCTCCGCGGAGTGGAACCATGTCGAAGGAAGTGTGAAGAGAAGCTTGCGGGAGGCTCAAGTAACGGATATACAGCGAATTCAGAATAAGTGGCTGTATAGAAAGTACGCAGTACAGAGGCATTTAATCAAGGAAAAAAATGGGCCAAGTTGTGTCAATGAAAAAGAGCTATTCCACGCTACCAGGTCCACAAGTCCCTCCCTCATTTGGCAAGGTGAAGATGGCTTTGACATGCGGCATTCCTCCGATGGAATGTGGGGTCGTGGCACATATTTCGCCTCTGAGGCCTCCTACAGCCATCTTGGATACTTCCACTATAACGCAGAAAGGAAAATGTTTCAGCTCTTTCTAGCCCACGTTTTAACTGGTGACAGTATTTTTCTGCCTCCAAACAGGAATATTAAAATGCCACCGTTGAAGAGATGGTCGACCATTCGATACGACAGCGTCAATGGAGTGACTGAGGGCTGTCTCGTGTACATTCTTTACAAGCTCGATATGGCATATCCTGCTTACTTGATAAATTATACAATTGGTCTTTCCTAATTTGATGGGTACGTTTGATCTACCATAGCCTCTGTCAGTACGTTGGATCAGTCAGCGAAAATTATTTATTTTACCATTATCGAGATTTTGTACTGCTTCTAAATGTAGCCAATCAGGAGCACGAACGACAAAATTTCGCTTTGAAGAAGTGTCTTTCGTCCAATCAGCAGCGAGAATGACAAAATTTCACTAGTGAAGAATGAAGTTAGTTGAGAGAGCGTGAGCTGACAGCCCTTGCGAAAAAAAAACTGCGCTcaaccgtccaagctacgagcactttaggcgccaaattggcgactaaaattttcatactggcgacttgattcgcaaaatagtcgcaaaataagcgatcactgaaaaatgataCTTGGAGAAAGAAAATCataatctattgtgtggatcgtactgaaacgataaggtcctctctgctgatatcccagagggaaaaggtgagaagatgtcgtcagtattcattgaaacgaacgctgagtaacAgaaagcaacgtggagttgaatcgttaaatgatgtggtcattgcagaccaacataactgacgaaactaaacttcgatgctaataaagcaaaaagtgttaattgcaatctgctacactgtatttttatttacatttttgacttatggaaattcaaggaaattatgtcttctggcgcctaaaagaatctttcggcgactaaagctaaagatttggtcgccaattggtcactgaagcaaatatttaacttggagggttgGCGCCCTTTTGAAAAATGGCCGAGGGAAGGTTTGTTTCTGCTTGCCCAGTCGCAGAATTTACTTTAAATCAAGAAAACAAAATGATTAAATTTAAGTAAATGTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H0J9	Protein mono-ADP-ribosyltransferase PARP12 OS=Homo sapiens OX=9606 GN=PARP12 PE=1 SV=1
Q8BZ20	Protein mono-ADP-ribosyltransferase PARP12 OS=Mus musculus OX=10090 GN=Parp12 PE=1 SV=3
Q460N3	Protein mono-ADP-ribosyltransferase PARP15 OS=Homo sapiens OX=9606 GN=PARP15 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008443 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR051712 all species →	Family	Mono-ADP-ribosyltransferase and antiviral protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45740 all species →	POLY [ADP-RIBOSE] POLYMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0140289 all species →	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0106.g10.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.