Detailed information of amic_s0107.g64.t2 in Acropora microphthalma

Genomic Location: sc0000107_pilon:867112...929839
NR annotation: XP_044179849.1, uncharacterized protein LOC122961271 isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25291Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
P27590Uromodulin OS=Rattus norvegicus OX=10116 GN=Umod PE=2 SV=1
Q28062Brevican core protein OS=Bos taurus OX=9913 GN=BCAN PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000073 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF00619
all species →		CARDCaspase recruitment domainDomainInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR036058
all species →		Homologous_superfamilyKazal domain superfamilyInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR002350
all species →		DomainKazal domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR001315
all species →		DomainCARD domainInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR037221
all species →		Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR051145
all species →		FamilyGrowth Arrest-Specific/Sex Hormone-Binding/Vitamin K-DependentInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24040
all species →		LAMININ G-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0042981
all species →		Biological Processregulation of apoptotic processInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0107.g64.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP