Detailed information of amic_s0112.g83.t1 in Acropora microphthalma

Genomic Location: sc0000112_pilon:885226...896034
NR annotation: XP_044175250.1, DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3T0Q3DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX=9913 GN=POLR2C PE=1 SV=1
P19387DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens OX=9606 GN=POLR2C PE=1 SV=2
P97760DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus OX=10090 GN=Polr2c PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007832 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01193
all species →		RNA_pol_LRNA polymerase Rpb3/Rpb11 dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036603
all species →		Homologous_superfamilyRNA polymerase, RBP11-like subunitInterproscan
IPR011263
all species →		DomainDNA-directed RNA polymerase, RpoA/D/Rpb3-typeInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0112.g83.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0003899
all species →		Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0112.g83.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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