Gene detail

Detailed information of amic_s0113.g106.t2 in Acropora microphthalma

Genomic Location: sc0000113_pilon:1468673...1482907
NR annotation: XP_044168296.1, putative aminopeptidase W07G4.4 isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0113.g106.t2

CCATTTACTTGAAGACTCTCAAAGACAAACATCGAACGTGTCGCACGTGAGCTGAGAAGATGTCCAGTCAATCTTGTGCAGTGGTTCGAGTGTGCAGTCCAACACGAGAGGGTTTTGACTGCTTTGTTCTTGTTTGTGAAAACCTTGAATGGGATAATCCAACATGGGATTTTTTAAAACAACCTATTCAAGCAGCTGCAAAGGTTGACAAAGCTGTTGGAGTGGATACTTTGTTGTTCCCTTGTAAAGAAACCTCCATGGTTTATTCTCCAACAGGACCTGTGAACCGAGATTATGATGATGTCAGACGTTTTGGCGAGGCTGCAAGTAAGGGTATAAAACGGGCTCTGAAGGCTGGCAGTGAGTCTCCCCTATTGGTCACCATTCCTGGGAAGACCTTTCCAAATTCCTGGTCTGTTTCATTGCTTGGAGCTCTTAATGAACTCTATCTGCCACTTGAACTTAGAGATGCATTCCCAGAGAAGCAGCAGAAAGTCAAACAGCTTGGAGTCATGGTTCTTGATCAAAGTCAAAACCTGGATTTTGTCACAGCTATTGATTCTGGAAGATATGTGTATCGAGACATTGGTGGATCTGATCCTGAAAGAATGGCTGCCCCACGTGTGGAAGAGTACATTACCAAGCTCTTTGGGGATTCATCACCTGTAAAAGTTTCAGTGGTTAAAGATGTGAAAGAGTTTGAGGCAAAGTATCCATTATATGAAGCAGTGAACAGGTGTTCAAGAGCTGTTGAAAGACATGCTGGCCGGGTGATCAACCTGGAGTATGTTGGAGAAGGAGAAATCACAAAGACCATCCTTCTTGTGGGGAAGGGTGTCACTTATGATACCGGAGGTGCAGACGTAAAAGCTGGTGGAGTTATGGCTGGGATGAGCAGGCTTGAATGGACAAAAGATAAGAGCACTTTTATTGCTTTCCAACGATTTTTAGTTCTCGAACTGTTTATTACACATGAGAAACAAACAAAAATTGCTGTGTCGGCAATCAATATAGCTGATGAGACTCTGGCAAGACTGAAGCCTAAGGGAATCAAGGTGTATGGTACCATGGCAATGGTCAGAAACAGCGTCGGGGCAGAGGGCTATGTTGCCGATGAGATCATCACATCAGCTGCTGGGACAAGAGTCAGGGTTGGTAACACTGATGCTGAAGGTCGCATGGCGATGGCTGATTCACTGCACTACATGAAAGAAAAGGTACTTGTAGCATTGCTTATATATCGCTGGCCACAGATAGTACTGGCTCGGCCCTCAAAGAAAAGGTTCCTGCACACATCGTTACTATAGCAACCCTAACGGGCCACGCTGTCTTGGCAATGGGGCCTGCCTATTCGATTGTGTTGGACAATGGGCCGGCTGCCCAAACCAAGTTTGCTCAGAACATTCAAGAAGGTTTTTAAATTCCATTGCGTACTTTTGGGTTATTAAATGTTTCACAAGCCAGTTTCAGCTAAACTGGACACGTGATGGGGGATCCATTTGAGATTTCAACTCTTCGAAGAGAGGATTACGAGTTCACAAATGCTAAGTCAGAATACGCTGATGTGTTGCAATGTAATAACTCGCCATCCAGTCGAACCCCAAGAGGACATCAGTTCCCAGCTGCCTTTCTAATCAGAGCTTCAGGATTGGACAAGCATGGCATTGATTCTGAGCATCCAGTTCGCTACTCACATTTTGACATTGCTGGTTCCAGCGGTGCTTTTCCATACGTCCCCACTGGTGCACCGCTGGTTGCTATGGCAACACACTTTCTGAAAGGCCATTGTTAAATTTCAACAACACATGCGCGTGTTTTTATCAATTTGTCAGAAAGTAGTCTTTAACAATGGCACCGTAGGATGCGATTCGGTTGTTTTTTCTCTTTTTTATTTCAACATTTTTTTCCAAATACAAATAAGTATACATCCCCGTCAGTCATAGCGTGAATCAATTAAATAGAAAAGCCCAGCGATTAATGTCAAATTTTCAAAAGAAAACTCGACGAAATAAACAGTGAATCCCTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q27245	Putative aminopeptidase W07G4.4 OS=Caenorhabditis elegans OX=6239 GN=lap-2 PE=3 SV=1
C0QSL9	Probable cytosol aminopeptidase OS=Persephonella marina (strain DSM 14350 / EX-H1) OX=123214 GN=pepA PE=3 SV=1
Q3AZE8	Probable cytosol aminopeptidase OS=Synechococcus sp. (strain CC9902) OX=316279 GN=pepA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002508 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00883 all species →	Peptidase_M17	Cytosol aminopeptidase family, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000819 all species →	Domain	Peptidase M17, leucyl aminopeptidase, C-terminal	Interproscan
IPR011356 all species →	Family	Peptidase M17, leucine aminopeptidase/peptidase B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11963 all species →	LEUCINE AMINOPEPTIDASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0070006 all species →	Molecular Function	metalloaminopeptidase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0019538 all species →	Biological Process	protein metabolic process	Interproscan
GO:0030145 all species →	Molecular Function	manganese ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0113.g106.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.