Gene detail

Detailed information of amic_s0113.g80.t1 in Acropora microphthalma

Genomic Location: sc0000113_pilon:1161936...1166256
NR annotation: XP_029196314.2, DDB1- and CUL4-associated factor 17-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8WHR0	DDB1- and CUL4-associated factor 17 OS=Danio rerio OX=7955 GN=dcaf17 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008725 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15802 all species →	DCAF17	DDB1- and CUL4-associated factor 17	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031620 all species →	Family	DDB1- and CUL4-associated factor 17	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14815 all species →	DDB1- AND CUL4-ASSOCIATED FACTOR 17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0080008 all species →	Cellular Component	Cul4-RING E3 ubiquitin ligase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23331	DCAF17; DDB1- and CUL4-associated factor 17	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.