Detailed information of amic_s0115.g23.t3 in Acropora microphthalma

Genomic Location: sc0000115_pilon:345674...382665
NR annotation: XP_044168929.1, serine-rich adhesin for platelets-like isoform X3 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P98066Tumor necrosis factor-inducible gene 6 protein OS=Homo sapiens OX=9606 GN=TNFAIP6 PE=1 SV=2
O57382Tolloid-like protein 2 OS=Xenopus laevis OX=8355 GN=tll2 PE=2 SV=1
O08859Tumor necrosis factor-inducible gene 6 protein OS=Mus musculus OX=10090 GN=Tnfaip6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000146 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431
all species →
CUBCUB domainDomainInterproscan
PF16977
all species →
ApeCC-terminal domain of apextrinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035914
all species →
Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000859
all species →
DomainCUB domainInterproscan
IPR031569
all species →
DomainApextrin, C-terminal domainInterproscan
IPR000515
all species →
DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19324
all species →
PERFORIN-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0055085
all species →
Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0115.g23.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP