Detailed information of amic_s0116.g63.t1 in Acropora microphthalma

Genomic Location: sc0000116_pilon:679235...692820
NR annotation: XP_015761842.1, PREDICTED: lysine-specific demethylase 7A-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZMT4Lysine-specific demethylase 7A OS=Homo sapiens OX=9606 GN=KDM7A PE=1 SV=2
Q3UWM4Lysine-specific demethylase 7A OS=Mus musculus OX=10090 GN=Kdm7a PE=1 SV=2
P0CF52Lysine-specific demethylase 7B OS=Danio rerio OX=7955 GN=jhdm1db PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001471 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17811
all species →		JHDJumonji helical domainDomainInterproscan
PF02373
all species →		JmjCJmjC domain, hydroxylaseDomainInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR003347
all species →		DomainJmjC domainInterproscan
IPR041070
all species →		DomainJumonji, helical domainInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR050690
all species →		FamilyJHDM1 Histone DemethylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23123
all species →		PHD/F-BOX CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482
all species →		Biological Processprotein demethylationInterproscan
GO:0032452
all species →		Molecular Functionhistone demethylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0116.g63.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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