Detailed information of amic_s0118.g36.t3 in Acropora microphthalma

Genomic Location: sc0000118_pilon:569025...575259
NR annotation: XP_015754676.1, PREDICTED: ATP-binding cassette sub-family A member 2-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P41233Phospholipid-transporting ATPase ABCA1 OS=Mus musculus OX=10090 GN=Abca1 PE=1 SV=4
O95477Phospholipid-transporting ATPase ABCA1 OS=Homo sapiens OX=9606 GN=ABCA1 PE=1 SV=3
P41234ATP-binding cassette sub-family A member 2 OS=Mus musculus OX=10090 GN=Abca2 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000297 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0118.g36.t3. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026082
all species →		FamilyABC transporter AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19229
all species →		ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005319
all species →		Molecular Functionlipid transporter activityInterproscan
GO:0006869
all species →		Biological Processlipid transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0042626
all species →		Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0140359
all species →		Molecular FunctionABC-type transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0118.g36.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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