Detailed information of amic_s0122.g29.t3 in Acropora microphthalma

Genomic Location: sc0000122_pilon:455617...474651
NR annotation: XP_029194099.2, LOW QUALITY PROTEIN: serine-rich adhesin for platelets-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q868Z9Papilin OS=Drosophila melanogaster OX=7227 GN=Ppn PE=1 SV=2
Q9UKP4A disintegrin and metalloproteinase with thrombospondin motifs 7 OS=Homo sapiens OX=9606 GN=ADAMTS7 PE=1 SV=2
O15072A disintegrin and metalloproteinase with thrombospondin motifs 3 OS=Homo sapiens OX=9606 GN=ADAMTS3 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006489 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05986
all species →		ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF19236
all species →		ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR050439
all species →		FamilyADAMTS and ADAMTS-likeInterproscan
IPR010294
all species →		DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR045371
all species →		DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR013273
all species →		FamilyADAMTS/ADAMTS-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →		ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0030198
all species →		Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0122.g29.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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