Detailed information of amic_s0126.g46.t2 in Acropora microphthalma

Genomic Location: sc0000126_pilon:783092...855600
NR annotation: XP_044170019.1, uncharacterized protein LOC114960504 isoform X3 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000389 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00931
all species →		NB-ARCNB-ARC domainDomainInterproscan
PF00791
all species →		ZU5ZU5 domainFamilyInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF00004
all species →		AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR002182
all species →		DomainNB-ARCInterproscan
IPR000906
all species →		DomainZU5 domainInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000488
all species →		DomainDeath domainInterproscan
IPR051787
all species →		FamilyEffector and Ciliary Development-Associated ProteinInterproscan
IPR006597
all species →		RepeatSel1-like repeatInterproscan
IPR003959
all species →		DomainATPase, AAA-type, coreInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45641
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0043531
all species →		Molecular FunctionADP bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0126.g46.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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