Detailed information of amic_s0127.g115.t1 in Acropora microphthalma

Genomic Location: sc0000127_pilon:1291981...1312990
NR annotation: XP_029204996.2, DNA ligase 4-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90YB1DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2
G3GTP0DNA ligase 4 OS=Cricetulus griseus OX=10029 GN=LIG4 PE=1 SV=1
Q8BTF7DNA ligase 4 OS=Mus musculus OX=10090 GN=Lig4 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF11411DNA_ligase_IVDNA ligase IVFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001357DomainBRCT domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR029710FamilyDNA ligase 4Interproscan
IPR021536DomainDNA ligase IV domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45997DNA LIGASE 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005958Cellular ComponentDNA-dependent protein kinase-DNA ligase 4 complexInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0032807Cellular ComponentDNA ligase IV complexInterproscan
GO:0051103Biological ProcessDNA ligation involved in DNA repairInterproscan

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