Gene detail

Detailed information of amic_s0127.g71.t1 in Acropora microphthalma

Genomic Location: sc0000127_pilon:717133...718181
NR annotation: XP_015772470.1, PREDICTED: F-box/LRR-repeat protein 15-like, partial [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009175 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050648 all species →	Family	F-box/Leucine-rich repeat	Interproscan
IPR006553 all species →	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13382 all species →	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10281	FBXL15; F-box and leucine-rich repeat protein 15	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.