Detailed information of amic_s0128.g59.t2 in Acropora microphthalma

Genomic Location: sc0000128_pilon:799333...828406
NR annotation: XP_044184640.1, leucine-rich repeat and IQ domain-containing protein 1-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0P5X1Leucine-rich repeat- and IQ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lrriq1 PE=2 SV=2
Q96JM4Leucine-rich repeat- and IQ domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LRRIQ1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003666 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799
all species →		LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF00612
all species →		IQIQ calmodulin-binding motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025875
all species →		RepeatLeucine rich repeat 4Interproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR000048
all species →		Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15454
all species →		NISCHARIN RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0128.g59.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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