Gene detail

Detailed information of amic_s0128.g64.t1 in Acropora microphthalma

Genomic Location: sc0000128_pilon:932505...941659
NR annotation: XP_044170457.1, peptidyl-prolyl cis-trans isomerase FKBP4-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0128.g64.t1

CTGTCGTCAGTGTGACTGAACATTCTAACAGTACCAGTGCCCTTCCACAGCGATGTGAGAACGAGGCTGTCAACATGGCGACTGACAGTGAGACAAGCATGGATCTGCAAAGCGATTTGGAAGAATATGGAGAAGACATAACATCAACGAAAGATGGTGGGGTAAGAAAGATCCTCAAGACAAAAGGCAAAGGAGATCAGCCACCTATCGGAAGCAAAGTAAGAGTTTATTATTCTGGAAAATTTATGGACGGACAAGAATTTGACTCCAACGTCGGTAGGAAAGAACCTTTTGAATTTGAAGTTGGAAAAGGTGTTGTGATTCGAGGATGGGACATCGCTGTTCCAACTATGACAGTCGGTGAGATAAGCCTGTTCACCATAACACCAGATTATGCTTATGGAAAAGAGGGCAGTGGTACCAAGATTCCACCCAATGCTACTCTAAGGTTTGAAATTGAGCTTGTCTGTTGGAAAGGAGAAGATGTGACGAAAGATGGACAGGTGACAAAGATCATTCTCAAAAAAGGTGAAGGCTACGATAAGCCAAACACTGGTGCAGCTTGTGAAGCTCATATTGTAGGAAAGTGTGATGACAAGGTGTTTGAAGATCGGGAAGTATCTTTCCTTATGCGAGAAGGATCAGAAGAGGGTCTACTACCTGGTGTGGAAGAAGCCATACGGAAGATGAGTAGTGATGAAAAGGCTCATGTCTGGATTTTCCCTGGAAAATGGGGATTTGGCAAGGGAGGGAAACCTGGTGTTCCAGAAAATGCAACAATAGAATACATTATACACTTGAAGAAGTTTCAAAATGTTAAAGAAAACTGGGAACTTAGCAACGAAGAGAAGATTTCAATGGCAACATCAGTAAAGGAGAAAGGAACTAAATACTTTAAGGAGGGAAAGTATACCATTGCCTCTCAACAGTACAACAGAGTTGTCCAGCTGTTAGATGGTTACTTTACCAAAGAGGAAAAAGAAATACGCGATCCGCTGTTGTTGGTTGGCCATCTCAATCTGGCGGCGTGTCACCTGCGGCTAAACAACAATTTCAAGTGCATGAAAGAGTGCGAAAAGGCCCTTCAGATTGATAAAAAGAGCGTTAAGGCATTTTTCAGGAGAGGAAAGGCTCGAGTAGCCGTTGAGGATCTGGACAAGGCAAGGGACGACTTTGAACACGTGTTGAAACTTGACCCTGGCAATAAAGACGCTCGGCAACAATTGCAATTAGTCAATAAAAAAATCCGACAACACACAGCGAAGGAGAAATCCATTTATGCCAATATGTTTGAACGGCTGGCTCGACAGGAAAAGGAAGAGGTCGTACAGGAAGAGCAAAAAGACGTCTTCCAGGAGGCTGCCGAGAAAGCGTTAATGCAGGCTGATTGTGATGCAGCAGCCTCGGACCCGGCGAGTGGTCAAGTGACGTCGTCAGCGGAAGTGAATGGCAGTGGAGATGTTGAAATGAAGGAAGAGGATTAAGGCGGAATCGTATGCTGACATGAGGTCGGTAGCAGAAGTAGTTATCATTGAGGAGGGAAGTGCGCCAGGCATGGAAGTTACATTTGACCAGAATTCATCCACTGGTTACTGTCAAGTTTGTTTGTTCCGGCAACGCGAGGCCTTCACGTTTCATATCGTGATCGTAACTTAGCTTTGAAAAAGTCGATTTTTAATTGTTTGGTTTTTCTCGGAAACATTGTGTACATCATGTTGGTGAACATATATCAGTCTTAGGGAAGCATAGTGAACTCTTAGCGTCGAAGTGACATTTAAGGAGAATTTATTCAGCGGTGCGTCTTCAAATTTTTACGTTTCGCAAGATATTTGTAACACACCATAAAGCTGTGGATGTGGTGTCTCTAGTTACACCGTTAGCTTCACTATCCGATATTCTCACCTTTTATGGTATCATAAATTATTTTTAACCCTGCCAATAGCATTTCAGGTCTAGGTGGAGTTTATTCGTCCTTTTTAATTAATGTTTGTGAAGTGATTATCATTATTATAATAATCGTAAAATTAACAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9TRY0	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Bos taurus OX=9913 GN=FKBP4 PE=1 SV=4
Q02790	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 SV=3
P27124	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Oryctolagus cuniculus OX=9986 GN=FKBP4 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000459 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00254 all species →	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001179 all species →	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR046357 all species →	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR050754 all species →	Family	Immunophilin FKBP-type domain-containing protein	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46512 all species →	PEPTIDYLPROLYL ISOMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003755 all species →	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09571	FKBP4_5; FK506-binding protein 4/5	EC:5.2.1.8	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.