Genomic Location: sc0000130_pilon:75859...87315
NR annotation: KXJ29477.1, Pogo transposable element with KRAB domain [Exaiptasia diaphana]
Species abbreviation AMICR · all data for this species · gene families
| CDS |
| amic_s0130.g3.t1 |
| Transcript |
| amic_s0130.g3.t1 |
| Protein |
| amic_s0130.g3.t1 |
| UniProt accession | Description |
|---|---|
| Q9P215 | Pogo transposable element with KRAB domain OS=Homo sapiens OX=9606 GN=POGK PE=1 SV=2 |
| Q80TC5 | Pogo transposable element with KRAB domain OS=Mus musculus OX=10090 GN=Pogk PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000155 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03184 all species → | DDE_1 | DDE superfamily endonuclease | Family | Interproscan |
| PF03221 all species → | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004875 all species → | Domain | DDE superfamily endonuclease domain | Interproscan |
| IPR006600 all species → | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR050863 all species → | Family | Centromere and Transposable Element-Derived Protein | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19303 all species → | TRANSPOSON | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
amic_s0130.g3.t1.
