Detailed information of amic_s0131.g13.t1 in Acropora microphthalma

Genomic Location: sc0000131_pilon:380066...389572
NR annotation: XP_015780009.1, PREDICTED: volume-regulated anion channel subunit LRRC8A-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4V8I7Volume-regulated anion channel subunit LRRC8A OS=Rattus norvegicus OX=10116 GN=Lrrc8a PE=1 SV=1
Q80WG5Volume-regulated anion channel subunit LRRC8A OS=Mus musculus OX=10090 GN=Lrrc8a PE=1 SV=1
Q8IWT6Volume-regulated anion channel subunit LRRC8A OS=Homo sapiens OX=9606 GN=LRRC8A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001383 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00656
all species →		Peptidase_C14Caspase domainDomainInterproscan
PF12534
all species →		Pannexin_likePannexin-like TM region of LRRC8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015917
all species →		DomainPeptidase C14A, caspase catalytic domainInterproscan
IPR029030
all species →		Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR001309
all species →		DomainPeptidase C14, p20 domainInterproscan
IPR002138
all species →		DomainPeptidase C14, caspase non-catalytic subunit p10Interproscan
IPR011600
all species →		DomainPeptidase C14, caspase domainInterproscan
IPR021040
all species →		DomainLRRC8, pannexin-like TM regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47901
all species →		CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004197
all species →		Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0131.g13.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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