Detailed information of amic_s0131.g4.t1 in Acropora microphthalma

Genomic Location: sc0000131_pilon:125829...153015
NR annotation: XP_044164509.1, LOW QUALITY PROTEIN: cytoplasmic dynein 1 heavy chain 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P38650Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1
Q9JHU4Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2
Q14204Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC1H1 PE=1 SV=5
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002054 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08385
all species →		DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF08393
all species →		DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042228
all species →		Homologous_superfamilyDynein heavy chain, linker, subdomain 3Interproscan
IPR042222
all species →		Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR013594
all species →		DomainDynein heavy chain, tailInterproscan
IPR013602
all species →		DomainDynein heavy chain, linkerInterproscan
IPR026983
all species →		FamilyDynein heavy chainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46532
all species →		MALE FERTILITY FACTOR KL5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005858
all species →		Cellular Componentaxonemal dynein complexInterproscan
GO:0007018
all species →		Biological Processmicrotubule-based movementInterproscan
GO:0030286
all species →		Cellular Componentdynein complexInterproscan
GO:0045505
all species →		Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959
all species →		Molecular Functiondynein light intermediate chain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0131.g4.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP