Gene detail

Detailed information of amic_s0132.g12.t1 in Acropora microphthalma

Genomic Location: sc0000132_pilon:238292...249575
NR annotation: XP_015776592.1, PREDICTED: palmitoyltransferase AKR1-like, partial [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0132.g12.t1

CGTAGACCTCTGCAAGAAGATTCAAGATGGCCGTCTTCGATGTTGTTATGAATGACAAGATTCAGGACCTGCAGGACTTGTTACGCTCCGATCCAAGATGTGCCAAATCTGTAGGATGGCACGGAATGACTCCTCTGCATCAAGCAGTGTTAAAAAACAACCAAGAAATGGTGAATCTGTTGCTGCAATACGATGCTAACGTGAATCAACCAAATGCCTACGGGGAAACGCCGCTACACTTGGCCTGCCAAATGGCTTCGTTACATTGTGTTCACAAGTTTGTGGAAGTCGGAGCAGACTTGAAAGCTGAAGATGCTGCTGGAAGAACGTGCATTCATCACGCTGCAAAAGGCGGATCTGTGTCAAAGCTTCATTACCTAGTTGCTTGTGGCTTGAATTTGAAAAGAAGAGATAATAGGGGTGTGACAGCACTGCATTTGGCAGCCGAACATGGTCACCTCGCAATCTGTGAATACCTCCTCCGGAATAAGAGATTTGCTCCTGATGAGCGCGACAGTACAAATACAACTCCACTGCACCTCGCAGCTAAGTATGCTCACTGTGAAGTTGCTTGGGCTCTTGAGAGCAGAAGCACATTATCAATGGTTTATGCTGAAGATTCCATGAGAAAATCACCAGTTGATTATGCTAGAGAAGGAAGAACTCCCAGACACTCATGGCTGCAAAGACATCTCAGGTACTGGCACACCAGTCGCTGCCCTTCCACTTGTCCTCCAAATGTGTGGATTCCTTGGATTCTGCTACTCGCGTTTCCTTCCTTTGGAATTTTACTTATTGTTCAAGCATTCAATCACCTTGCGACGTTCTTTGCTGCACTCTCAACATTGGCAATTTTTGTCTTCTTCAATTTGTTTGCATTTTCCCGGCACAGAATGAGGCATATTTCTGGAGTTCAAAATCCTGCATTTGCTGGTTTTTTCTTTGGGTCAATAATACAAAGCTTACTCTGTTATTTTTTGTATTTGGTGCCGATTATCCTTTGAAACAGGAAGTAAAATGGTGAAAAGTGTTAAAACGTATTTTATTGTATAAAACAATTTCTCGCATGTAGTTGGGAGGTCTGCCAAACCGATGATACAGCTTGACCTTTATTATAAACACAACCACACCTAAAATGTTTTTTTGCCAATGCTGAGTCCTCTGACAAAATACCAACCCAACAGAAAACTTTACCATGCAAAGAAACGTAATAAGGGGGGATGGGTGAGGCAGATCAGGCCAATTGGATGGCAACAAACCAACAAAACAACAAATTGGATTCTGACAGATCACATGACCTGAATGCGTCTGTGTGCGTGCACTTGACCCCATTCTCCGAGCAGTGTGTGAGAAAAACATTTTTTTGCTTAATTCATCGCTCAGTTTGTTGAAAATAATGCATGGTTCTGGATGGGCTAAGAAGGTTTCATAAAAATGTCAATATCAGTAGTTTTTTGTTTGCCATATTATTTCTAATGTAATGATTGTTAGTCTTTCAATTTCTTTCTGTCACTAATAGTTCATTTGTAAACTGATTTGTTTTATTAATTACTTAGGTCATTGAAGCTTCAGAAATTTTTTTGTTATCTGGCTAAAGATTGCTTGTTAGTTGTATTATAGAGGATCAATGCAAAATACCTTAACAATTCTTATGATTATGGTCAGAGTTTATCTGGGCTTTTCTAGCAGTCATCCTTTTGATTGTCAGTGTAATAAGTTTATGGAAACTTTTCTCTGATCCTGGTATTGTCAACTGTAGTAGAATTTCAGATGTTGGGGAAACACTGACAATTGTGGATGTTGCAAAAGGTGTTATATCAGAAGATGATTTCTGTTGGGTGTGTGAGATTGTCATGCCGGCATTCACCAAACACTGTCGTCTTTGTAACGCTTGTATGCTGAGTTTAGATCATCATTGTCTGTTTTTGACGCGCTGTGTGGCCGCCAACAATCACAGATCATTTGTGCTGTTCATGATCGAGGCTATGTTCGCAAACTTGTTATTCGCAAGAGCAGCAGTATCTTGAAGCCATGGGCCAGGATGTTTACGTCGTGGTTCTTTTTTTCATCAACTGCTTTGGATTTCTCTACATCTTATTCTTGATGTTCTTTCAGTTCAAGGTTATAACTGACGGGGGAACCACATACTATTCTCCAGATGGTCGCGCATTGCACAGGTAAACTCAGCTGTCATTCATTCGGAGCAAAGAAATGCTCAGAGAGCTT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006266 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR051165 all species →	Family	Multifunctional Ankyrin Repeat Domain-Containing Protein	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24123 all species →	ANKYRIN REPEAT-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0132.g12.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.