Genomic Location: sc0000132_pilon:440146...540934
NR annotation: XP_044169857.1, uncharacterized protein LOC114951253 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families
| CDS |
| amic_s0132.g27.t1 |
| Transcript |
| amic_s0132.g27.t1 |
| Protein |
| amic_s0132.g27.t1 |
| UniProt accession | Description |
|---|---|
| Q9N2I7 | Dipeptidyl peptidase 4 OS=Felis catus OX=9685 GN=DPP4 PE=2 SV=1 |
| P22411 | Dipeptidyl peptidase 4 OS=Sus scrofa OX=9823 GN=DPP4 PE=1 SV=3 |
| P14740 | Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000275 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02770 all species → | Acyl-CoA_dh_M | Acyl-CoA dehydrogenase, middle domain | Domain | Interproscan |
| PF05729 all species → | NACHT | NACHT domain | Domain | Interproscan |
| PF00326 all species → | Peptidase_S9 | Prolyl oligopeptidase family | Domain | Interproscan |
| PF03281 all species → | Mab-21 | Mab-21 protein nucleotidyltransferase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029058 all species → | Homologous_superfamily | Alpha/Beta hydrolase fold | Interproscan |
| IPR032675 all species → | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR006091 all species → | Domain | Acyl-CoA oxidase/dehydrogenase, middle domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR007111 all species → | Domain | NACHT nucleoside triphosphatase | Interproscan |
| IPR035994 all species → | Homologous_superfamily | Nucleoside phosphorylase superfamily | Interproscan |
| IPR009100 all species → | Homologous_superfamily | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily | Interproscan |
| IPR001375 all species → | Domain | Peptidase S9, prolyl oligopeptidase, catalytic domain | Interproscan |
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR046373 all species → | Homologous_superfamily | Acyl-CoA oxidase/dehydrogenase, middle domain superfamily | Interproscan |
| IPR046903 all species → | Domain | Mab-21-like, nucleotidyltransferase domain | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46844 all species → | SLR5058 PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016627 all species → | Molecular Function | oxidoreductase activity, acting on the CH-CH group of donors | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0009116 all species → | Biological Process | nucleoside metabolic process | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008236 all species → | Molecular Function | serine-type peptidase activity | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
amic_s0132.g27.t1.Genes whose expression across the transcriptome samples of Acropora microphthalma tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Acropora microphthalma, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
