Gene detail

Detailed information of amic_s0132.g46.t1 in Acropora microphthalma

Genomic Location: sc0000132_pilon:954769...1000270
NR annotation: XP_015774318.1, PREDICTED: uncharacterized protein LOC107352503 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0132.g46.t1

atgggaCTGATTTGGTCTATATTTGGATATGtggctgctggaaagaatccaccacaggtcaaatacaaagtgaaagaagctggtgatgttccaaattccacagaaacctggagtaatgttcatctgccaattgatattttgctattgactgtggagagctgtgattttttgagctgtttctctttgctggatcaacctttcaaaagttacaaggtggacattggtcctgtgtactttgggtgcatgggaaacgccagtgagcaagaaaagctaaaggttgcattgatgaattgctttaaaggagctgcaaccccaaggggttctttgacagtggttctgaatgccgtgagagtcttgaaacctaaggctgtattttcagtgggaacttgcagtagtttagacatgaagaaggtcagagtgggagatgtagtcatctcttcgaagctaactactgaagagggattcagaactccttgtagcccacgtctttgcaatcttgttctagatgcaccatatgggtgggttgctccgttgaaaaatccaggtgaattggaagttaaagtacattgcgacggtgatatcctgagccagtcgctgagagagaagtgtcaacgtggtcaaattagtgagctacatcctggagcaattgcaattgaaacagagggagaaggtgtctatgctgcagcctatgatgcaaatatcgagtgggtgatagtgaaaggtgtggccagttattttcatcaagatgagtctgcatctcctgaatggatgtcttttgcgagcgccatggctgcctctgtggtggccaagctgctaattgatccagcagttttccgggaatggcggcactataaccaagagaaccctgcagctccacatcaagccgtgacagctaataatttgggtaaccaagcatcaagtgcaatcccagaaagagggcaacaacatccttttgatgctgtagggacctcaggcaacgaaaatggaaggcaaggtgcacgtcatggagtatctggagaccaacaagattccttgagagagtatggagaatcatatgtcaagttgttaatcagcacaaaatatctcgaaaaagaaaaaagagaagtcattgaagaaattctaaccaaagaagtccaggactatttgaaatttcatgatcattcaggagatagtcatgcacgaaccatgaaatccttcactgagcacttaacgaacgtctactgtgtacacttggtcactgttgatgtgggttctgttatcatcattctggagtgtcttacgttagatagcctggagcatttatggagggactatctcgctggtgatctcgataaacttgctgaccgataccttgttactagtgagatgaaggagaagctcaaggtcgaggcaaatatcctcaagacaaccatagaacaagaaaactacttgaactgcaagaaggctctcgtggaacttggaagtacacattcagCATCTGGAGCTGAAGCTGATGAAACGGAGATACAGGGACAGGAGTACTATGAACAGGGTAGCTATGATGATGATTCGAGCGGACAGACAAGTGAGACGACAGAAGAGGATTTATTTCACGAAATCCACGAACCACAGTTGGAAGATCAAGAAGAACCAGACAAAGTGGCAATATTCGAAGGAACTGTGACCAGCGAGGGCCTCCAATTGGACCTAAATGTAGGGGCCATTCACCTAACCTTCCCTCCCGATACTGTGGCTGAGCCCACCGATATAAGGGTCTATAGATGGAAATATGGTGCCTGTTTGCCTCAACTCATGGAGCATGAGGCTGTCGTGAGTAATGTGATTGAGATCTCTGCCGCCCCGGAGTTCGGGGGCTTAAAATTCAACAATGAGGTGAAAGTGGTTCTTTCACACAGTGCTGCAGGCCTTCAAGGCTACGAGGTGGTTATGAAAAGACTCACAGATAAGGAGAAGAATGAATGGGAAGAAATAGCTGGATGTGATGATATTCGACAAGTTTCGGATATCGAGGATGATCACCCATATCCAAAGAACGTTCCATATTCCTTTCCTGTGGTTCAGGAGGTTCCTCAGGATGAATTTCAGGGTCACGGTCTGTTTTGTGGACCAATACTACGTATTCTTTGCTCTTCAAGTGCCACATTTTTGGAGCCTGTTACAATACAGTTACCTGTTTCTCTTGGAAATGAGCTGGTAAATATTCCACAACCTTCTGATTGTCGTGTCAGGATATTTTTTCACAGCCCGGAGAGAGAAACCAAGGAATGGGTTGAAATTTCTGACAAGCTTGAAAATCCTGCAAGTTACGATGGCAGACTTGTTAAGTTCAAGGTTCAGCGCTTCTCAGGATACGCTTTCCTCCTTGATCGGACCATTATTGGGTCTGGTGTTGTTGCTTTTGGGATCATTGCCTATCTTTCCGAAGACATGGCCGGAGGTTGTTATCTAAGGTTTGATGGCAACGTGTCACACAAGGCCCAGCTTCAAGTTCGTCTGGTTAGCGACCAAGTACATTGCAAAGTGGAATTTCGTGACACCCCAAATACCACAGTAAACAAGAATTTGTTGTCAACACTGAACTTAAACTGGTCTTCTTTCAGTATTGATCGTCAGgtttcttcctcttcaaacgcgtcagtacctcctttagaggaagcccctgcagtctgctcaatttccacttccaagagtaaactaaaattgacgcttttaggcagcgagtgggggtctactaaaggagggctgtcgacaatcaaccgagagattgccattgagttggcgaagaacggcaatgtggaagtctgtatgtacctccccgctttcagtgatgaagatgaaaaagcagccgataaatgcggggttcgtctgctgaaagcaaaggagaaggctgggtatgatccaatagactggttggcctctattccaagggatcatcagatggatgttgtgatgggccatgggatccgtcttggtcgccagatctcgcttataagagaattgcaccaaagatgcaaatggctacaggttgttcatactgacgatgaagaacttggcatgtttaagaactataatgatcctactgtcaaaggtgagaaaaagcatgaagctgcggtcaaactgtgcaaagaagcagatcacgttgtggctattggtcccaaattggctgatacatactctcgttcttgtggaaagagaaaagtcattgttttcaccccaggcatcttttcagagtttgctaatataaaacaagatatagacgaaagaaaagtatttcatgttttagtctttggacgtggtgatattgaagattttcgtttaaagggatacgatattgctgcccgtgcagttgctttgctgaaagacgagaaagactctttcaaacttgtgtttgttggtgcgccaactggaaaagaagagcgaaaacgagtggaagaaatgttgcttgaggaaggcattttaccccatcaacttatcgtgcgcagtgctatggaaagaaatcagcttgctgaacagttttatgaagctgatcttgtcataatgccctcaagaaccgaaggttttggtctaagtgcactcgaagctttgtctgctggtctgcctgtgcgtgtgagtgctaattcaggccttgggcaggccttgcaagagttaacctttggtgagaacgttgtgctgaattcagaagatcctgctgattgggcaaaggaaataaaggcagttcgatAGTTCTTGATTGTGGTATGA

Transcript

amic_s0132.g46.t1

atttacagagacctctacagcttcagctcaagttaatgtagaagaaggcaagtcagacaaagaagaaccaagttcaaccctagcaacattttgccaccctgatccaacaacaaatattaatgctggaacattattttggatgataaagtgacttcatgcgacaaaaatggaagacaaggagtcttttatcgaaccatctgaagaccaacattcctagagtgctggtgatatgggaCTGATTTGGTCTATATTTGGATATGtggctgctggaaagaatccaccacaggtcaaatacaaagtgaaagaagctggtgatgttccaaattccacagaaacctggagtaatgttcatctgccaattgatattttgctattgactgtggagagctgtgattttttgagctgtttctctttgctggatcaacctttcaaaagttacaaggtggacattggtcctgtgtactttgggtgcatgggaaacgccagtgagcaagaaaagctaaaggttgcattgatgaattgctttaaaggagctgcaaccccaaggggttctttgacagtggttctgaatgccgtgagagtcttgaaacctaaggctgtattttcagtgggaacttgcagtagtttagacatgaagaaggtcagagtgggagatgtagtcatctcttcgaagctaactactgaagagggattcagaactccttgtagcccacgtctttgcaatcttgttctagatgcaccatatgggtgggttgctccgttgaaaaatccaggtgaattggaagttaaagtacattgcgacggtgatatcctgagccagtcgctgagagagaagtgtcaacgtggtcaaattagtgagctacatcctggagcaattgcaattgaaacagagggagaaggtgtctatgctgcagcctatgatgcaaatatcgagtgggtgatagtgaaaggtgtggccagttattttcatcaagatgagtctgcatctcctgaatggatgtcttttgcgagcgccatggctgcctctgtggtggccaagctgctaattgatccagcagttttccgggaatggcggcactataaccaagagaaccctgcagctccacatcaagccgtgacagctaataatttgggtaaccaagcatcaagtgcaatcccagaaagagggcaacaacatccttttgatgctgtagggacctcaggcaacgaaaatggaaggcaaggtgcacgtcatggagtatctggagaccaacaagattccttgagagagtatggagaatcatatgtcaagttgttaatcagcacaaaatatctcgaaaaagaaaaaagagaagtcattgaagaaattctaaccaaagaagtccaggactatttgaaatttcatgatcattcaggagatagtcatgcacgaaccatgaaatccttcactgagcacttaacgaacgtctactgtgtacacttggtcactgttgatgtgggttctgttatcatcattctggagtgtcttacgttagatagcctggagcatttatggagggactatctcgctggtgatctcgataaacttgctgaccgataccttgttactagtgagatgaaggagaagctcaaggtcgaggcaaatatcctcaagacaaccatagaacaagaaaactacttgaactgcaagaaggctctcgtggaacttggaagtacacattcagCATCTGGAGCTGAAGCTGATGAAACGGAGATACAGGGACAGGAGTACTATGAACAGGGTAGCTATGATGATGATTCGAGCGGACAGACAAGTGAGACGACAGAAGAGGATTTATTTCACGAAATCCACGAACCACAGTTGGAAGATCAAGAAGAACCAGACAAAGTGGCAATATTCGAAGGAACTGTGACCAGCGAGGGCCTCCAATTGGACCTAAATGTAGGGGCCATTCACCTAACCTTCCCTCCCGATACTGTGGCTGAGCCCACCGATATAAGGGTCTATAGATGGAAATATGGTGCCTGTTTGCCTCAACTCATGGAGCATGAGGCTGTCGTGAGTAATGTGATTGAGATCTCTGCCGCCCCGGAGTTCGGGGGCTTAAAATTCAACAATGAGGTGAAAGTGGTTCTTTCACACAGTGCTGCAGGCCTTCAAGGCTACGAGGTGGTTATGAAAAGACTCACAGATAAGGAGAAGAATGAATGGGAAGAAATAGCTGGATGTGATGATATTCGACAAGTTTCGGATATCGAGGATGATCACCCATATCCAAAGAACGTTCCATATTCCTTTCCTGTGGTTCAGGAGGTTCCTCAGGATGAATTTCAGGGTCACGGTCTGTTTTGTGGACCAATACTACGTATTCTTTGCTCTTCAAGTGCCACATTTTTGGAGCCTGTTACAATACAGTTACCTGTTTCTCTTGGAAATGAGCTGGTAAATATTCCACAACCTTCTGATTGTCGTGTCAGGATATTTTTTCACAGCCCGGAGAGAGAAACCAAGGAATGGGTTGAAATTTCTGACAAGCTTGAAAATCCTGCAAGTTACGATGGCAGACTTGTTAAGTTCAAGGTTCAGCGCTTCTCAGGATACGCTTTCCTCCTTGATCGGACCATTATTGGGTCTGGTGTTGTTGCTTTTGGGATCATTGCCTATCTTTCCGAAGACATGGCCGGAGGTTGTTATCTAAGGTTTGATGGCAACGTGTCACACAAGGCCCAGCTTCAAGTTCGTCTGGTTAGCGACCAAGTACATTGCAAAGTGGAATTTCGTGACACCCCAAATACCACAGTAAACAAGAATTTGTTGTCAACACTGAACTTAAACTGGTCTTCTTTCAGTATTGATCGTCAGgtttcttcctcttcaaacgcgtcagtacctcctttagaggaagcccctgcagtctgctcaatttccacttccaagagtaaactaaaattgacgcttttaggcagcgagtgggggtctactaaaggagggctgtcgacaatcaaccgagagattgccattgagttggcgaagaacggcaatgtggaagtctgtatgtacctccccgctttcagtgatgaagatgaaaaagcagccgataaatgcggggttcgtctgctgaaagcaaaggagaaggctgggtatgatccaatagactggttggcctctattccaagggatcatcagatggatgttgtgatgggccatgggatccgtcttggtcgccagatctcgcttataagagaattgcaccaaagatgcaaatggctacaggttgttcatactgacgatgaagaacttggcatgtttaagaactataatgatcctactgtcaaaggtgagaaaaagcatgaagctgcggtcaaactgtgcaaagaagcagatcacgttgtggctattggtcccaaattggctgatacatactctcgttcttgtggaaagagaaaagtcattgttttcaccccaggcatcttttcagagtttgctaatataaaacaagatatagacgaaagaaaagtatttcatgttttagtctttggacgtggtgatattgaagattttcgtttaaagggatacgatattgctgcccgtgcagttgctttgctgaaagacgagaaagactctttcaaacttgtgtttgttggtgcgccaactggaaaagaagagcgaaaacgagtggaagaaatgttgcttgaggaaggcattttaccccatcaacttatcgtgcgcagtgctatggaaagaaatcagcttgctgaacagttttatgaagctgatcttgtcataatgccctcaagaaccgaaggttttggtctaagtgcactcgaagctttgtctgctggtctgcctgtgcgtgtgagtgctaattcaggccttgggcaggccttgcaagagttaacctttggtgagaacgttgtgctgaattcagaagatcctgctgattgggcaaaggaaataaaggcagttcgatAGTTCTTGATTGTGGTATGAATTTTGAATGGAATTTGTTCCAATTTACAGCCAGGGATTGTCTCTTACTCGCTAAGCATGTACTGTTTACAGTCATTGCATTAACAACATTGGTGCACTTATAAACCCCTTTCTGTTGCACACTTGGTGATGATGGAGGACAAGCCATTTGTCGGGCATTATTAAAGAACAGCACTCTTACACATGTTCATTTGGGCAGCAATGACCTCGGTGAACCCACAGCTGCCATTCTGTCACAGGTTGTAGTTTCAAACAAGGCGCTGGTGGATCTAAACTTATCGTGTAACACCATTGGACCGGAAGGAGGAAAGTCATTGCAGGAAGGAATGGAAGAGAACACAACAATACAATCCATGGATTTGAGACTAACAGATGTGGGACAAGAAAATGAATACTGTATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D1BD84	D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) OX=446469 GN=mshA PE=3 SV=1
D2S4K7	D-inositol 3-phosphate glycosyltransferase OS=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / CCUG 61914 / KCC A-0152 / KCTC 9177 / NBRC 13315 / NRRL B-3577 / G-20) OX=526225 GN=mshA PE=3 SV=1
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000025 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706 all species →	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF00791 all species →	ZU5	ZU5 domain	Family	Interproscan
PF01048 all species →	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035994 all species →	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR000906 all species →	Domain	ZU5 domain	Interproscan
IPR000845 all species →	Domain	Nucleoside phosphorylase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46401 all species →	GLYCOSYLTRANSFERASE WBBK-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009116 all species →	Biological Process	nucleoside metabolic process	Interproscan
GO:0009103 all species →	Biological Process	lipopolysaccharide biosynthetic process	Interproscan
GO:0016757 all species →	Molecular Function	glycosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0132.g46.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.