Detailed information of amic_s0135.g28.t1 in Acropora microphthalma

Genomic Location: sc0000135_pilon:704996...705919
NR annotation: XP_044170169.1, uncharacterized protein LOC122954231 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0C2I3Transposon Ty1-DR6 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-DR6 PE=3 SV=1
Q07793Transposon Ty1-DR4 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-DR4 PE=3 SV=2
Q07163Transposon TyH3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae OX=4932 GN=TY1B PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000087 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665
all species →		rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584
all species →		DomainIntegrase, catalytic coreInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46585
all species →		INTEGRASE CORE DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0135.g28.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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