Gene detail

Detailed information of amic_s0135.g5.t1 in Acropora microphthalma

Genomic Location: sc0000135_pilon:104366...105505
NR annotation: XP_015769787.1, PREDICTED: uncharacterized protein LOC107348279 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010948 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00011 all species →	HSP20	Hsp20/alpha crystallin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001436 all species →	Family	Alpha crystallin/Small heat shock protein, animal type	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR002068 all species →	Domain	Alpha crystallin/Hsp20 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45640 all species →	HEAT SHOCK PROTEIN HSP-12.2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0009408 all species →	Biological Process	response to heat	Interproscan
GO:0042026 all species →	Biological Process	protein refolding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09542	CRYAB; crystallin, alpha B	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.