Gene detail

Detailed information of amic_s0135.g6.t1 in Acropora microphthalma

Genomic Location: sc0000135_pilon:107236...110217
NR annotation: XP_015775190.1, PREDICTED: immediate early response 3-interacting protein 1-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P85007	Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Ier3ip1 PE=3 SV=1
Q9CR20	Immediate early response 3-interacting protein 1 OS=Mus musculus OX=10090 GN=Ier3ip1 PE=3 SV=1
Q1JQC2	Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010699 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08571 all species →	Yos1	Yos1-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013880 all species →	Family	Yos1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15858 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0030134 all species →	Cellular Component	COPII-coated ER to Golgi transport vesicle	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22939	IER3IP1, YOS1; immediate early response 3-interacting protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.