Gene detail

Detailed information of amic_s0136.g8.t1 in Acropora microphthalma

Genomic Location: sc0000136_pilon:123504...166485
NR annotation: XP_044169177.1, uncharacterized protein LOC114976684 isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0136.g8.t1

ATGATCACGTGGTCGCATCCCGAATTGTACAATATGTATGCCATTAACGGTTATTCACTACAATTCAAAAAGTTTGGTTCACAAAAATGGTCCCAGTTTGTCTTTACTCTGGGAGAAGATCACAGGATTACCGATTTGGAACAGGACACGCCTTATTTCGTGCGTCTGAAATCAGAAAATGAGTTTGGAAGAGGACTTCCTAGTGAGGGTTTAGAATTGCGCACTAGAAAAGCCTCAACAGGAATGAGTGGTTCAGCAATTGCCTTGGCTACTGTTCTTCCTCTGCTATCGCTGATTATTCTGGGAATAGCTGCAGTCCTGGTGTACAGAAGATGGAAAAAGAGAAAGGAAAGGATGAATGCCACAGATGATAGGCTACCCATGAATCCAATCACGCCGGGAAATCAGCAACAATTTGTCAGAAACGAACACTTTGTGCAAGACCGCTATGCTCCAATTCCCGGCGTGTCGCCCAACGAAGCAAGCACTGCCATTAAGGCAGCCTCGTTCTCATGGCGCGAAATTCCACATCATCAGCTGACTTTGGGTAAAATTCTTGGAGAAGGAGAATTTGGAATGGTTTTGAAGGGAGAGCTGGCCGAAGAAGATGGCTCCATTGTAACGTGCGCCGTTAAAAAGCTGAAACGTTCTGCTACTGAAAGCGACTTTAAAGATTTGCTGAACGAGCTAGAGATAATGTCCTCAGTGGGGAAACATCCCAACCTTGTGAACCTGATTGGTGCATGCTCAGCTAATGGACCTTTGATGATTCTGGTTGAATTCGCTGAACACGGTAACCTTCTTTCTTATCTGCGTGAAAACAGAAAGCAGAATTATGAAAACATGAATGAATACACTCTTGAAATCAGTGCAGCGGAAAGATTGAAGATAGCATGCGATGTCTGCGATGGAATGAGTCATCTCGCTGCAATGAAGTGCGCTCATCGGGATTTGGCTGCGAGGAACATTCTTCTCGCGGAAGGAATGGTGGCAAAAGTGTCTGATTTTGGCCTTTCGCGGGATATTTACACCGACAATGTGTACGAGAAGAAGACCGCGGGTAAGCTTCCAGCAAAATGGATGGCCATGGAATCCCTTGAACAAGGCATTTACACAAGCCGAAGTGACGTGTGGTCTTTCGGTGTCCTTCTTTGGGAAATCGAAACTGGCGATGTTATTGACCACAGAGGAAATGAATTTATTGTCAGTTTTGTTTCCTTGCCTTTGTTCGTATCGAATTCCGAAGGAAAGAATATCTTGTACATTTCGTCCTTTGAGAACACTATCGTTGACCTCTACAGTCCATTTCTCAACCCAAAGCTAAAACACTACGTTGTATTTCCTAAGAATATTCGAGAAATTGTATTCAGTGGGAATCAACGCATGGAAGCTTATACTGGTAAGGCGAACAAGGGAATTCGCCTGAAGGCCGACAAAGAGATAAGCATGTACGGAGTTACAACTACTATTGGTATGGGCGAAGCGTTTCTTGTGTTTCCTGTGGATGTCCTTGATACGTACTATATCGTGCCTACTTTTCATCCAATATCCTCTTCCATTATTCAAGTCACAGCCACAGAAAACAACACTGAAGTCATATTCCGGCTTAAACTTGCCAGGAATGGTAGAGTTTCTTATGAAAGTGTAAGATATAGAGACGGAGATTTTATAAATGTCACTCTTAATGCGCTGGAGGTGTTTCAAGTGTTAGGTGAATCGAGTCTCGAGGGTACTGTGGTGACTTCATCTAAACCTATAGCTTTATTCTCCGGGAATGACTGCAGTATGCTTCCTTACCCTTCTCAGCCGTGCAATCAGCTTGTAGAGCAAATACCCCCTGTTCGAATCTGGGGTCAGCACTTTATAACCAGCCCGACGCCAAACAGCATGGGCGGCGACCTTTTTCAAATCATAGCCTCCAGTAACAACACAGATGTTTTCGTAGATAGGAGTCATGTTAAGTCACTGCAGGAAGGCTTTAGCCATGAGCTCGAAGCGCTTTGGAATCAGTCTGTGGTGATTTCCACGAGTAAGCCGAGTCTCGTAGTCCAGTATACCAAGGCTACAGGAAGAACTAGGAGCCCTGCAATGTCTATTGTTCCGCCGACGGAATGGTCAGCTAATGACTTTTCCGTTTATGTGGAAGGAAGTGGCTCAGGAGGTTTTAACGAGGGAGGCTTTGTGAATGTTATCATTAACACTTCCTTGCAAAAAGGTCTTCGCGTGCGGGGACCTCTGAAAGATGTCCCTATGAACTGGACTACAGTTCCGGGAGGTTTCTCTCGAGTTTCTTTGAAATTAAGCCGCAGTGGTTTATACCATGTTTTTCATGAAAGTCCGCTTGCGAATTTTACGTCGGTTGTGTACCTTAAAAGATCACAAAGTAAATACGAATACAGATCTTCCTTTCCGATTGGTTTCAAATTCGACTTTGGCGTGAAATCAGGTTGCTCAGAGACAGAAACACGTGGAGGCGACAAGATAGACAATGATTGTGATGGGAGAACAGACGAAGAACTAGCCAATGGCAAAGATGATGATGGAGACGGGCGTGTGGATGAGGATTTATTGACGCCGCCAATAGAAGTTACTATGCCGAAGAACTTTGTCTCTCCACCTTTGCTTGCTTGTAGCAAATCATTCGATGAAGGTTATCGATCGAAACCGGGTTTTTTTCCAGTGGTAGGAATGAACACAAGATACGGTGTATGCGCCATGCGGGGCAATGTACATATTATGCATAAGGATAAGACTGTTAACGAATACTCTGATTCTCAGTGTATACGTGAAATTGAACGCACCTGGACGATACAAGATGCCTGTCAGAATGAAATAGTTCACAGCCAGCTAATCAATATCTTTACTCCCAGGAATCACACTCTTCAAATGCCAAGAAATATGACTCTCATTTGTAGAAGTGAGAAATATCTTCAACAATTTTATACCGGCGAGGTTTCTCAGGGGTTTACTAGACCATGTAAAGGTCAAGTCAACATAACATTTATGCCTGAAAGATTTATTGGGAATTGCATCAGTGGCCTGGCGAAGCTGGAGCGCACGTGGAAGATGGATATAACATTAAGAACTTCATCCGTTGGAAATTCTATCTTAGAAATTGAGGTCCTATCATTTAGCAATGGAAGTCTCAATGTTGCAGTTTTGATAAAGATGGATAGGAAAACCAGTATCAACCAGCAGCAACTTCTTCAAACCATTAAGGGACGCATGGCGGAAGGGGTTTTGGGAAAATTCCAAGTGGATCACTCGTCCATTGCAATACAAGCCCCAGGAACCACTAATTATGAGGTGACGTTTCGCGTGACAAACATGGAATTCAACGTTGAGCTTAGAGACAGATCATCCCTTAGGTTTAGATCACTCTCGGTTGAGCTGGAACGCGAGGGTAAGCTTCCAGCAAAATGGATTACCATGGAATCCCTTGAACAAGGCATTTACACAAGCCGAAGTGACGTGTGGTCTTTCGGTGTCCTTCTTTGGGAAATCGAAACTGGCGGCTGTGCCCCATATGCCGGAATTGTTGTTAGCGAATTCTTGGAGAAACTGAAATCTGGGAGTCGATTGGACAAGCCACGATACTGCACCGATTCGCTGTATGCCGTCATGCTCCGTTGCTGGAAAGCCAATCCTCAGGAGAGAACGACTTTTGACGAAATGAGTGAAGAACTCCACCAAATGTATCAACAAACAACCGAGTATTTGGGGCCTGAAGAATTCAAAATTGAACCAGATTATGTGAACACTTCTGTGGAAGATGCGTCTAGTGCTTAG

Transcript

amic_s0136.g8.t1

CGTGTCTTCTGGTGTCTGTTAAAACTCTTTCCTTTAATTTCTTTTTCAGCTGACGAAATTGTTCCAGGACATTGAAGGGTTCGAAAGAGTTGAAATTCTCGGATTTGTAAACGGCAGCGTAAAAGTTCGTTTTCGAGTTATTGTAAAAGTAGACAAAACTAAAGAGAAAGAGCCATCAGTGATTGTTCAGAAAGTTGGCAAAACTCTCAGTGTAAGCGTGAAGGAGGGAAAATTGGGCGACTACAAAGTGAAGCCTGTTGTTGAGTTCAAAGAGGTTCCTCCTCCGCCAAAGAATGTTAAATATAGTGACGTTACAGAAAGGGACGCCATGATCACGTGGTCGCATCCCGAATTGTACAATATGTATGCCATTAACGGTTATTCACTACAATTCAAAAAGTTTGGTTCACAAAAATGGTCCCAGTTTGTCTTTACTCTGGGAGAAGATCACAGGATTACCGATTTGGAACAGGACACGCCTTATTTCGTGCGTCTGAAATCAGAAAATGAGTTTGGAAGAGGACTTCCTAGTGAGGGTTTAGAATTGCGCACTAGAAAAGCCTCAACAGGAATGAGTGGTTCAGCAATTGCCTTGGCTACTGTTCTTCCTCTGCTATCGCTGATTATTCTGGGAATAGCTGCAGTCCTGGTGTACAGAAGATGGAAAAAGAGAAAGGAAAGGATGAATGCCACAGATGATAGGCTACCCATGAATCCAATCACGCCGGGAAATCAGCAACAATTTGTCAGAAACGAACACTTTGTGCAAGACCGCTATGCTCCAATTCCCGGCGTGTCGCCCAACGAAGCAAGCACTGCCATTAAGGCAGCCTCGTTCTCATGGCGCGAAATTCCACATCATCAGCTGACTTTGGGTAAAATTCTTGGAGAAGGAGAATTTGGAATGGTTTTGAAGGGAGAGCTGGCCGAAGAAGATGGCTCCATTGTAACGTGCGCCGTTAAAAAGCTGAAACGTTCTGCTACTGAAAGCGACTTTAAAGATTTGCTGAACGAGCTAGAGATAATGTCCTCAGTGGGGAAACATCCCAACCTTGTGAACCTGATTGGTGCATGCTCAGCTAATGGACCTTTGATGATTCTGGTTGAATTCGCTGAACACGGTAACCTTCTTTCTTATCTGCGTGAAAACAGAAAGCAGAATTATGAAAACATGAATGAATACACTCTTGAAATCAGTGCAGCGGAAAGATTGAAGATAGCATGCGATGTCTGCGATGGAATGAGTCATCTCGCTGCAATGAAGTGCGCTCATCGGGATTTGGCTGCGAGGAACATTCTTCTCGCGGAAGGAATGGTGGCAAAAGTGTCTGATTTTGGCCTTTCGCGGGATATTTACACCGACAATGTGTACGAGAAGAAGACCGCGGGTAAGCTTCCAGCAAAATGGATGGCCATGGAATCCCTTGAACAAGGCATTTACACAAGCCGAAGTGACGTGTGGTCTTTCGGTGTCCTTCTTTGGGAAATCGAAACTGGCGATGTTATTGACCACAGAGGAAATGAATTTATTGTCAGTTTTGTTTCCTTGCCTTTGTTCGTATCGAATTCCGAAGGAAAGAATATCTTGTACATTTCGTCCTTTGAGAACACTATCGTTGACCTCTACAGTCCATTTCTCAACCCAAAGCTAAAACACTACGTTGTATTTCCTAAGAATATTCGAGAAATTGTATTCAGTGGGAATCAACGCATGGAAGCTTATACTGGTAAGGCGAACAAGGGAATTCGCCTGAAGGCCGACAAAGAGATAAGCATGTACGGAGTTACAACTACTATTGGTATGGGCGAAGCGTTTCTTGTGTTTCCTGTGGATGTCCTTGATACGTACTATATCGTGCCTACTTTTCATCCAATATCCTCTTCCATTATTCAAGTCACAGCCACAGAAAACAACACTGAAGTCATATTCCGGCTTAAACTTGCCAGGAATGGTAGAGTTTCTTATGAAAGTGTAAGATATAGAGACGGAGATTTTATAAATGTCACTCTTAATGCGCTGGAGGTGTTTCAAGTGTTAGGTGAATCGAGTCTCGAGGGTACTGTGGTGACTTCATCTAAACCTATAGCTTTATTCTCCGGGAATGACTGCAGTATGCTTCCTTACCCTTCTCAGCCGTGCAATCAGCTTGTAGAGCAAATACCCCCTGTTCGAATCTGGGGTCAGCACTTTATAACCAGCCCGACGCCAAACAGCATGGGCGGCGACCTTTTTCAAATCATAGCCTCCAGTAACAACACAGATGTTTTCGTAGATAGGAGTCATGTTAAGTCACTGCAGGAAGGCTTTAGCCATGAGCTCGAAGCGCTTTGGAATCAGTCTGTGGTGATTTCCACGAGTAAGCCGAGTCTCGTAGTCCAGTATACCAAGGCTACAGGAAGAACTAGGAGCCCTGCAATGTCTATTGTTCCGCCGACGGAATGGTCAGCTAATGACTTTTCCGTTTATGTGGAAGGAAGTGGCTCAGGAGGTTTTAACGAGGGAGGCTTTGTGAATGTTATCATTAACACTTCCTTGCAAAAAGGTCTTCGCGTGCGGGGACCTCTGAAAGATGTCCCTATGAACTGGACTACAGTTCCGGGAGGTTTCTCTCGAGTTTCTTTGAAATTAAGCCGCAGTGGTTTATACCATGTTTTTCATGAAAGTCCGCTTGCGAATTTTACGTCGGTTGTGTACCTTAAAAGATCACAAAGTAAATACGAATACAGATCTTCCTTTCCGATTGGTTTCAAATTCGACTTTGGCGTGAAATCAGGTTGCTCAGAGACAGAAACACGTGGAGGCGACAAGATAGACAATGATTGTGATGGGAGAACAGACGAAGAACTAGCCAATGGCAAAGATGATGATGGAGACGGGCGTGTGGATGAGGATTTATTGACGCCGCCAATAGAAGTTACTATGCCGAAGAACTTTGTCTCTCCACCTTTGCTTGCTTGTAGCAAATCATTCGATGAAGGTTATCGATCGAAACCGGGTTTTTTTCCAGTGGTAGGAATGAACACAAGATACGGTGTATGCGCCATGCGGGGCAATGTACATATTATGCATAAGGATAAGACTGTTAACGAATACTCTGATTCTCAGTGTATACGTGAAATTGAACGCACCTGGACGATACAAGATGCCTGTCAGAATGAAATAGTTCACAGCCAGCTAATCAATATCTTTACTCCCAGGAATCACACTCTTCAAATGCCAAGAAATATGACTCTCATTTGTAGAAGTGAGAAATATCTTCAACAATTTTATACCGGCGAGGTTTCTCAGGGGTTTACTAGACCATGTAAAGGTCAAGTCAACATAACATTTATGCCTGAAAGATTTATTGGGAATTGCATCAGTGGCCTGGCGAAGCTGGAGCGCACGTGGAAGATGGATATAACATTAAGAACTTCATCCGTTGGAAATTCTATCTTAGAAATTGAGGTCCTATCATTTAGCAATGGAAGTCTCAATGTTGCAGTTTTGATAAAGATGGATAGGAAAACCAGTATCAACCAGCAGCAACTTCTTCAAACCATTAAGGGACGCATGGCGGAAGGGGTTTTGGGAAAATTCCAAGTGGATCACTCGTCCATTGCAATACAAGCCCCAGGAACCACTAATTATGAGGTGACGTTTCGCGTGACAAACATGGAATTCAACGTTGAGCTTAGAGACAGATCATCCCTTAGGTTTAGATCACTCTCGGTTGAGCTGGAACGCGAGGGTAAGCTTCCAGCAAAATGGATTACCATGGAATCCCTTGAACAAGGCATTTACACAAGCCGAAGTGACGTGTGGTCTTTCGGTGTCCTTCTTTGGGAAATCGAAACTGGCGGCTGTGCCCCATATGCCGGAATTGTTGTTAGCGAATTCTTGGAGAAACTGAAATCTGGGAGTCGATTGGACAAGCCACGATACTGCACCGATTCGCTGTATGCCGTCATGCTCCGTTGCTGGAAAGCCAATCCTCAGGAGAGAACGACTTTTGACGAAATGAGTGAAGAACTCCACCAAATGTATCAACAAACAACCGAGTATTTGGGGCCTGAAGAATTCAAAATTGAACCAGATTATGTGAACACTTCTGTGGAAGATGCGTCTAGTGCTTAGAAGATAAAGACGAAGGGACAAACCAAGGTCACTCACCGTGATGACGGTGGAACAAAGGGGTGACGATTTAAGTGTTAGTGGAGGAGGGAATGGTAAACCGAATCAATGGGTGGATGGGTCGTGGCTTAGGGATGGTAAATCGAGAGCGACCGATCTAGACACATTGGACATACGCCATTTTTTTTTTATATCAGCATAACGAACCGCCCTTGTATATACAGCAATTTTTTTTTGTACGACAGAGATTTCGTAGTTGGTTAAATTTGTCGAAGTATTTCGTCCAAGCGCATTTTTTGGCTATTATTTTAAACGGATTGTCAGTGGAAGTACTGGGCGAAAATCATAACTGTAGGAATTCTAACATTTTTGTAAAGTAGAATTTTATCCCCTATTTTTTTGGCTTAAGGAACTGATTTCCATATAAATCTATACAATGGGGCTTTTTTACCCAACCAATTTGACCCCGGACACCAGTTAAGAAAATAAGAGCTTTTGCCAACGAGAGGCAGTTACAAGGAACGCGCCTACCATAAGTTTAGGACGAAGATAGATACACTTTTGCAAAACCTTTTCACGAACTGCAACACTGCTCTTTTGAATCCCTCTCTATTTTTGTGGTAGCGTTCTGTGGATCATTGGCTTTTGTCAGGGTGTGGAGAATGATATATTTTGGAAAAAAAGCATTGATACTTTTAAACAATTATAAAAAGGAGTGAGAATTGATAGAAATGCAAATGATTGGTATCCTTTTTCTTTGGTGTGGGAGTACTGATTTATAGCTTTTTGCGTCGCACTCGCGCGAAAACAGCTAGAATTGATCATCTTTCCTGTCCTTCATTATGCCGGGCGCTGAATATCAGACGAATATTCCTGAGAATTGCGTCTCAATACCTACCTAAACATTTGTGAGGACACCTCTTGGCAACAACACGGTGGCGTAATCGTAATGAGACCAGCGCAGCGATTAAAGTGAACGCCGAGTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90Z00	Fibroblast growth factor receptor 1-A OS=Danio rerio OX=7955 GN=fgfr1a PE=1 SV=2
P18460	Fibroblast growth factor receptor 3 OS=Gallus gallus OX=9031 GN=FGFR3 PE=2 SV=1
P11362	Fibroblast growth factor receptor 1 OS=Homo sapiens OX=9606 GN=FGFR1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001017 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF17517 all species →	IgGFc_binding	IgGFc binding protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR035234 all species →	Domain	IgGFc-binding protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0136.g8.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.